RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSP1	YGR028W	AIM29	P36154	155 aa		4.25	□□□□□ -1.73
MSP1	YGR028W	YAL064W	P39711	94 aa		4.25	□□□□□ -1.73
MSP1	YGR028W	YOP1	Q12402	180 aa		4.25	□□□□□ -1.73
MSP1	YGR028W	YBR013C	P38215	129 aa		4.24	□□□□□ -1.73
MSP1	YGR028W	ERG28	P40030	148 aa		4.24	□□□□□ -1.73
MSP1	YGR028W	YFL067W	P43537	175 aa		4.24	□□□□□ -1.73
MSP1	YGR028W	DFM1	Q12743	341 aa	Known RBP	4.24	□□□□□ -1.73
MSP1	YGR028W	ADH2	P00331	348 aa	Known RBP	4.23	□□□□□ -1.73
MSP1	YGR028W	SEC4	P07560	215 aa	Known RBP	4.23	□□□□□ -1.73
MSP1	YGR028W	ATG8	P38182	117 aa	RIP-Chip data	4.23	□□□□□ -1.73	not detected
MSP1	YGR028W	YDR029W	Q12111	104 aa		4.23	□□□□□ -1.73
MSP1	YGR028W	YLR118C	Q12354	227 aa		4.23	□□□□□ -1.73
MSP1	YGR028W	YER078W-A	Q3E7A2	54 aa		4.23	□□□□□ -1.73
MSP1	YGR028W	YPR014C	Q6B0W2	109 aa		4.23	□□□□□ -1.73
MSP1	YGR028W	HHF1	P02309	103 aa	Known RBP	4.22	□□□□□ -1.73
MSP1	YGR028W	YKR070W	P36151	352 aa	Known RBP	4.22	□□□□□ -1.73
MSP1	YGR028W	YER076C	P40049	302 aa		4.22	□□□□□ -1.73
MSP1	YGR028W	YJR146W	P47174	117 aa		4.22	□□□□□ -1.73
MSP1	YGR028W	SNA2	P56508	79 aa		4.22	□□□□□ -1.73
MSP1	YGR028W	YCR024C-B	Q3E7Z8	88 aa		4.22	□□□□□ -1.73
MSP1	YGR028W	PRE1	P22141	198 aa	Known RBP	4.21	□□□□□ -1.74
MSP1	YGR028W	SEC72	P39742	193 aa	Known RBP	4.21	□□□□□ -1.74
MSP1	YGR028W	OST3	P48439	350 aa		4.21	□□□□□ -1.74
MSP1	YGR028W	YLR307C-A	Q3E825	87 aa		4.21	□□□□□ -1.74
MSP1	YGR028W	PFY1	P07274	126 aa		4.2	□□□□□ -1.74
MSP1	YGR028W	SMP1	P38128	452 aa		4.2	□□□□□ -1.74
MSP1	YGR028W	YBR219C	P38317	127 aa		4.2	□□□□□ -1.74
MSP1	YGR028W	YEL008W	P40001	126 aa		4.2	□□□□□ -1.74
MSP1	YGR028W	PAU15	P40585	124 aa		4.2	□□□□□ -1.74
MSP1	YGR028W	CIN5	P40917	295 aa		4.2	□□□□□ -1.74
MSP1	YGR028W	DAN1	P47178	298 aa		4.2	□□□□□ -1.74
MSP1	YGR028W	ARO2	P28777	376 aa	Known RBP	4.19	□□□□□ -1.74
MSP1	YGR028W	RPC10	P40422	70 aa		4.19	□□□□□ -1.74
MSP1	YGR028W	YIL014C-A	Q02598	104 aa		4.19	□□□□□ -1.74
MSP1	YGR028W	YLR194C	Q05777	254 aa		4.19	□□□□□ -1.74
MSP1	YGR028W	TRP1	P00912	224 aa		4.18	□□□□□ -1.74
MSP1	YGR028W	CNB1	P25296	175 aa		4.18	□□□□□ -1.74
MSP1	YGR028W	LCL1	Q02786	101 aa		4.18	□□□□□ -1.74
MSP1	YGR028W	TPT1	Q12272	230 aa	Known RBP	4.18	□□□□□ -1.74
MSP1	YGR028W	ENV10	Q99382	181 aa		4.18	□□□□□ -1.74
MSP1	YGR028W	POR1	P04840	283 aa	Known RBP	4.17	□□□□□ -1.74
MSP1	YGR028W	MMS2	P53152	137 aa		4.17	□□□□□ -1.74
MSP1	YGR028W	MGR2	Q02889	113 aa		4.17	□□□□□ -1.74
MSP1	YGR028W	YOR008C-A	Q3E7B9	74 aa		4.17	□□□□□ -1.74
MSP1	YGR028W	DDR48	P18899	430 aa	Known RBP	4.16	□□□□□ -1.74
MSP1	YGR028W	NSE4	P43124	402 aa		4.16	□□□□□ -1.74
MSP1	YGR028W	YMR295C	Q03559	197 aa		4.16	□□□□□ -1.74
MSP1	YGR028W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.16	□□□□□ -1.74
MSP1	YGR028W	PEX22	P39718	180 aa		4.15	□□□□□ -1.75
MSP1	YGR028W	PKR1	Q03880	122 aa	Known RBP	4.15	□□□□□ -1.75
MSP1	YGR028W	HMRA2	P0CY13	119 aa		4.14	□□□□□ -1.75
MSP1	YGR028W	TOS6	P48560	102 aa		4.14	□□□□□ -1.75
MSP1	YGR028W	PAU19	P0CE85	124 aa		4.13	□□□□□ -1.75
MSP1	YGR028W	PAU21	P0CE86	164 aa		4.13	□□□□□ -1.75
MSP1	YGR028W	PAU22	P0CE87	164 aa		4.13	□□□□□ -1.75
MSP1	YGR028W	PAU3	P25610	124 aa		4.13	□□□□□ -1.75
MSP1	YGR028W	VTC1	P40046	129 aa	RIP-Chip data	4.13	□□□□□ -1.75	not detected
MSP1	YGR028W	YMR175W-A	Q3E766	64 aa		4.13	□□□□□ -1.75
MSP1	YGR028W	YEL045C	P32616	141 aa		4.12	□□□□□ -1.75
MSP1	YGR028W	YKL070W	P36087	169 aa		4.12	□□□□□ -1.75
MSP1	YGR028W	ATP15	P21306	62 aa		4.11	□□□□□ -1.75
MSP1	YGR028W	APS1	P35181	156 aa		4.11	□□□□□ -1.75
MSP1	YGR028W	YAR029W	P39549	74 aa		4.11	□□□□□ -1.75
MSP1	YGR028W	CYT2	Q00873	224 aa		4.11	□□□□□ -1.75
MSP1	YGR028W	COA3	Q3E7B2	85 aa		4.11	□□□□□ -1.75
MSP1	YGR028W	YAL065C	O13511	128 aa		4.1	□□□□□ -1.75
MSP1	YGR028W	RPL31A	P0C2H8	113 aa	Known RBP	4.1	□□□□□ -1.75
MSP1	YGR028W	YJL197C-A	P0C5P0	93 aa		4.1	□□□□□ -1.75
MSP1	YGR028W	AIM19	P40502	157 aa		4.1	□□□□□ -1.75
MSP1	YGR028W	ERV14	P53173	138 aa		4.1	□□□□□ -1.75
MSP1	YGR028W	EOS1	P53938	366 aa		4.1	□□□□□ -1.75
MSP1	YGR028W	TIM11	P81449	96 aa	Predicted RBP	4.1	□□□□□ -1.75
MSP1	YGR028W	GSP1	P32835	219 aa	Known RBP	4.09	□□□□□ -1.75
MSP1	YGR028W	GSP2	P32836	220 aa	Known RBP	4.09	□□□□□ -1.75
MSP1	YGR028W	CWP2	P43497	92 aa		4.09	□□□□□ -1.75
MSP1	YGR028W	YGL118C	P53132	145 aa		4.09	□□□□□ -1.75
MSP1	YGR028W	HHO1	P53551	258 aa		4.09	□□□□□ -1.75
MSP1	YGR028W	ECM12	O13529	151 aa		4.08	□□□□□ -1.76
MSP1	YGR028W	ZEO1	Q08245	113 aa		4.08	□□□□□ -1.76
MSP1	YGR028W	CMC2	Q3E7A4	109 aa		4.08	□□□□□ -1.76
MSP1	YGR028W	YER134C	P40081	178 aa		4.07	□□□□□ -1.76
MSP1	YGR028W	AQY2	P0CD90	149 aa		4.06	□□□□□ -1.76
MSP1	YGR028W	YDR042C	Q03205	200 aa		4.06	□□□□□ -1.76
MSP1	YGR028W	YML108W	Q03759	105 aa		4.06	□□□□□ -1.76
MSP1	YGR028W	YDR010C	Q12426	110 aa		4.06	□□□□□ -1.76
MSP1	YGR028W	YGL041C-B	Q3E750	60 aa		4.06	□□□□□ -1.76
MSP1	YGR028W	GTT1	P40582	234 aa		4.05	□□□□□ -1.76
MSP1	YGR028W	POP3	P53833	195 aa	Predicted RBP	4.05	□□□□□ -1.76
MSP1	YGR028W	SMD1	Q02260	146 aa	Predicted RBP	4.05	□□□□□ -1.76
MSP1	YGR028W	YBL112C	Q3E7Y4	105 aa		4.05	□□□□□ -1.76
MSP1	YGR028W	Q0032	Q9ZZX7	96 aa		4.05	□□□□□ -1.76
MSP1	YGR028W	SHU1	P38751	150 aa		4.04	□□□□□ -1.76
MSP1	YGR028W	FYV4	P38783	130 aa	Predicted RBP	4.04	□□□□□ -1.76
MSP1	YGR028W	COX14	P39103	70 aa		4.04	□□□□□ -1.76
MSP1	YGR028W	OXA1	P39952	402 aa		4.04	□□□□□ -1.76
MSP1	YGR028W	AIM11	P87275	137 aa		4.04	□□□□□ -1.76
MSP1	YGR028W	YMR103C	Q04436	120 aa		4.04	□□□□□ -1.76
MSP1	YGR028W	YDL241W	Q07738	123 aa		4.04	□□□□□ -1.76
MSP1	YGR028W	PAU16	P35994	123 aa		4.03	□□□□□ -1.76
MSP1	YGR028W	RPF1	P38805	295 aa	Known RBP	4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms