RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C GRH1Q04410 372 aaKnown RBP4.56□□□□□ -1.68
CDC34YDR054C WIP1Q2V2P8 89 aa4.56□□□□□ -1.68
CDC34YDR054C VAR1P02381 398 aa4.55□□□□□ -1.68
CDC34YDR054C RPS8AP0CX39 200 aaKnown RBP4.55□□□□□ -1.68
CDC34YDR054C RPS8BP0CX40 200 aaKnown RBP4.55□□□□□ -1.68
CDC34YDR054C YKR032WP36127 104 aa4.55□□□□□ -1.68
CDC34YDR054C YER134CP40081 178 aa4.55□□□□□ -1.68
CDC34YDR054C YDR274CP87283 123 aa4.55□□□□□ -1.68
CDC34YDR054C VPS71Q03433 280 aa4.55□□□□□ -1.68
CDC34YDR054C PKR1Q03880 122 aaKnown RBP4.55□□□□□ -1.68
CDC34YDR054C GPI19Q04082 140 aa4.55□□□□□ -1.68
CDC34YDR054C YPL257WQ08974 193 aa4.55□□□□□ -1.68
CDC34YDR054C YPR063CQ12160 140 aa4.55□□□□□ -1.68
CDC34YDR054C YCR023CP25351 611 aa4.54□□□□□ -1.68
CDC34YDR054C GSP1P32835 219 aaKnown RBP4.54□□□□□ -1.68
CDC34YDR054C GSP2P32836 220 aaKnown RBP4.54□□□□□ -1.68
CDC34YDR054C YHR140WP38842 239 aa4.54□□□□□ -1.68
CDC34YDR054C YNL200CP40165 246 aaKnown RBP4.54□□□□□ -1.68
CDC34YDR054C YDR115WQ04598 105 aa4.54□□□□□ -1.68
CDC34YDR054C SHH4Q06236 168 aa4.54□□□□□ -1.68
CDC34YDR054C YBR200W-AQ3E755 54 aa4.54□□□□□ -1.68
CDC34YDR054C YIL134C-AQ45U18 67 aa4.54□□□□□ -1.68
CDC34YDR054C BRP1P53194 125 aa4.53□□□□□ -1.68
CDC34YDR054C Q0255P03881 472 aa4.52□□□□□ -1.69
CDC34YDR054C YCR043CP25361 127 aa4.52□□□□□ -1.69
CDC34YDR054C YJL028WP47062 111 aa4.52□□□□□ -1.69
CDC34YDR054C PBA1Q05778 276 aa4.52□□□□□ -1.69
CDC34YDR054C YAL063C-AQ3E791 96 aa4.52□□□□□ -1.69
CDC34YDR054C YCL021W-AQ96VH3 125 aa4.52□□□□□ -1.69
CDC34YDR054C MRPL11P36521 249 aaPredicted RBP4.51□□□□□ -1.69
CDC34YDR054C SMP1P38128 452 aa4.51□□□□□ -1.69
CDC34YDR054C YIL014C-AQ02598 104 aa4.51□□□□□ -1.69
CDC34YDR054C PBI2P0CT04 75 aaKnown RBP4.5□□□□□ -1.69
CDC34YDR054C RPL2AP0CX45 254 aaKnown RBP4.5□□□□□ -1.69
CDC34YDR054C RPL2BP0CX46 254 aaKnown RBP4.5□□□□□ -1.69
CDC34YDR054C RPS11AP0CX47 156 aaKnown RBP4.5□□□□□ -1.69
CDC34YDR054C RPS11BP0CX48 156 aaKnown RBP4.5□□□□□ -1.69
CDC34YDR054C NRG2P38082 220 aa4.5□□□□□ -1.69
CDC34YDR054C TEM1P38987 245 aa4.5□□□□□ -1.69
CDC34YDR054C YGL118CP53132 145 aa4.5□□□□□ -1.69
CDC34YDR054C YLR361C-AQ3E795 98 aa4.5□□□□□ -1.69
CDC34YDR054C YPR014CQ6B0W2 109 aa4.5□□□□□ -1.69
CDC34YDR054C MBF1O14467 151 aaKnown RBP4.49□□□□□ -1.69
CDC34YDR054C PRE1P22141 198 aaKnown RBP4.49□□□□□ -1.69
CDC34YDR054C RRT13P40042 185 aa4.49□□□□□ -1.69
CDC34YDR054C YDR366CP87287 132 aa4.49□□□□□ -1.69
CDC34YDR054C COX12Q01519 83 aa4.49□□□□□ -1.69
CDC34YDR054C YER078W-AQ3E7A2 54 aa4.49□□□□□ -1.69
CDC34YDR054C HTL1Q9URQ5 78 aa4.49□□□□□ -1.69
CDC34YDR054C YHR139C-AO13536 103 aa4.48□□□□□ -1.69
CDC34YDR054C YCR001WP25347 104 aa4.48□□□□□ -1.69
CDC34YDR054C TVP18Q04767 167 aa4.48□□□□□ -1.69
CDC34YDR054C YLR042CQ07990 161 aa4.48□□□□□ -1.69
CDC34YDR054C MGR2Q02889 113 aa4.47□□□□□ -1.69
CDC34YDR054C DGA1Q08650 418 aa4.47□□□□□ -1.69
CDC34YDR054C YNL162W-AQ3E7A8 72 aa4.47□□□□□ -1.69
CDC34YDR054C COA6Q3E846 104 aa4.47□□□□□ -1.69
CDC34YDR054C PAU16P35994 123 aa4.46□□□□□ -1.7
CDC34YDR054C POP3P53833 195 aaPredicted RBP4.46□□□□□ -1.7
CDC34YDR054C PPT2Q12036 173 aa4.46□□□□□ -1.7
CDC34YDR054C YOR020W-AQ3E824 90 aa4.46□□□□□ -1.7
CDC34YDR054C TDA8Q6B2U8 126 aa4.46□□□□□ -1.7
CDC34YDR054C PFY1P07274 126 aa4.45□□□□□ -1.7
CDC34YDR054C ARO2P28777 376 aaKnown RBP4.45□□□□□ -1.7
CDC34YDR054C YNL217WP40152 326 aa4.45□□□□□ -1.7
CDC34YDR054C IGD1P43598 195 aa4.45□□□□□ -1.7
CDC34YDR054C AUA1P32450 94 aa4.44□□□□□ -1.7
CDC34YDR054C FYV4P38783 130 aaPredicted RBP4.44□□□□□ -1.7
CDC34YDR054C KRE9P39005 276 aa4.44□□□□□ -1.7
CDC34YDR054C DCV1P43595 202 aa4.44□□□□□ -1.7
CDC34YDR054C LSM8P47093 109 aaKnown RBP4.44□□□□□ -1.7
CDC34YDR054C FCF1Q05498 189 aaPredicted RBP4.44□□□□□ -1.7
CDC34YDR054C RDS3Q06835 107 aaPredicted RBP4.44□□□□□ -1.7
CDC34YDR054C SCS22Q6Q595 175 aa4.44□□□□□ -1.7
CDC34YDR054C FUN14P18411 198 aa4.43□□□□□ -1.7
CDC34YDR054C SCM4P32564 187 aa4.43□□□□□ -1.7
CDC34YDR054C YPT53P36019 220 aa4.43□□□□□ -1.7
CDC34YDR054C ERV14P53173 138 aa4.43□□□□□ -1.7
CDC34YDR054C YDR042CQ03205 200 aa4.43□□□□□ -1.7
CDC34YDR054C YPR170W-BP0C5R9 85 aa4.42□□□□□ -1.7
CDC34YDR054C HMRA2P0CY13 119 aa4.42□□□□□ -1.7
CDC34YDR054C YRA2P36036 203 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
CDC34YDR054C TOS6P48560 102 aa4.42□□□□□ -1.7
CDC34YDR054C TSC3Q3E790 80 aa4.42□□□□□ -1.7
CDC34YDR054C YKR070WP36151 352 aaKnown RBP4.41□□□□□ -1.7
CDC34YDR054C YGL088WP53151 121 aa4.41□□□□□ -1.7
CDC34YDR054C CNL1Q06333 122 aa4.41□□□□□ -1.7
CDC34YDR054C DFM1Q12743 341 aaKnown RBP4.41□□□□□ -1.7
CDC34YDR054C YCR075W-AQ3E830 75 aa4.41□□□□□ -1.7
CDC34YDR054C SEC11P15367 167 aa4.4□□□□□ -1.71
CDC34YDR054C MSA2P36157 363 aa4.4□□□□□ -1.71
CDC34YDR054C RPF1P38805 295 aaKnown RBP4.4□□□□□ -1.71
CDC34YDR054C YJR146WP47174 117 aa4.4□□□□□ -1.71
CDC34YDR054C YMR103CQ04436 120 aa4.4□□□□□ -1.71
CDC34YDR054C SCW10Q04951 389 aa4.4□□□□□ -1.71
CDC34YDR054C VAM10Q08474 114 aa4.4□□□□□ -1.71
CDC34YDR054C NAT5Q08689 176 aa4.4□□□□□ -1.71
CDC34YDR054C COA3Q3E7B2 85 aa4.4□□□□□ -1.71
CDC34YDR054C UTP20P35194 2493 aaKnown RBP4.39□□□□□ -1.71
CDC34YDR054C UBC5P15732 148 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms