RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 TRIM13O60858 407 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 CHRNB3Q05901 458 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 TFDP3Q5H9I0 405 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 SPATA2Q9UM82 520 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 NCAPD2Q15021 1401 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 ARHGEF40Q8TER5 1519 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 C2orf81A6NN90 581 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 FDX1P10109 184 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 ZNF677Q86XU0 584 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 RAET1EQ8TD07 263 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 KAT6AQ92794 2004 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 PRKCEQ02156 737 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 USP39Q53GS9 565 aaKnown RBP13.54□□□□□ -0.24
USP6NL-205ENST00000609104 KRT77Q7Z794 578 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 MAP2P11137 1827 aaKnown RBP13.54□□□□□ -0.24
USP6NL-205ENST00000609104 EIF2S1P05198 315 aaKnown RBP13.54□□□□□ -0.24
USP6NL-205ENST00000609104 ZNF543Q08ER8 600 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 KATNAL1Q9BW62 490 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 C2CD2LO14523 706 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 FEN1P39748 380 aaKnown RBP13.54□□□□□ -0.24
USP6NL-205ENST00000609104 MMRN1Q13201 1228 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 UXS1Q8NBZ7 420 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 PCDHB7Q9Y5E2 793 aa13.54□□□□□ -0.24
USP6NL-205ENST00000609104 CDC42EP1Q00587 391 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 KLHDC7AQ5VTJ3 777 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 CLEC17AQ6ZS10 378 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 VMP1Q96GC9 406 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 ADGRA3Q8IWK6 1321 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 MMGT1Q8N4V1 131 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 MTA3Q9BTC8 594 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 PRDM15P57071 1507 aaPredicted RBP13.53□□□□□ -0.24
USP6NL-205ENST00000609104 CPSF4O95639 269 aaKnown RBP13.53□□□□□ -0.24
USP6NL-205ENST00000609104 DARSP14868 501 aaKnown RBP13.53□□□□□ -0.24
USP6NL-205ENST00000609104 EPHB2P29323 1055 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 GPC1P35052 558 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 FDFT1P37268 417 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 SEL1L3Q68CR1 1132 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 NLRP9Q7RTR0 991 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 TRIM48Q8IWZ4 208 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 TDRD5Q8NAT2 981 aaKnown RBP13.53□□□□□ -0.24
USP6NL-205ENST00000609104 SCUBE2Q9NQ36 999 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 GLRA3O75311 464 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 SHROOM1Q2M3G4 852 aaPredicted RBP13.53□□□□□ -0.24
USP6NL-205ENST00000609104 FAM117BQ6P1L5 589 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 TMEM79Q9BSE2 394 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 RPS6KA5O75582 802 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 RASA2Q15283 850 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 KDM7AQ6ZMT4 941 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 ATG4AQ8WYN0 398 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 VTA1Q9NP79 307 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 SLC25A13Q9UJS0 675 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 M0QYT0 321 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 SERPINB8P50452 374 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 ZNF614Q8N883 585 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 IARS2Q9NSE4 1012 aaKnown RBP13.53□□□□□ -0.24
USP6NL-205ENST00000609104 CFAP99D6REC4 459 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 DNALI1O14645 258 aaPredicted RBP13.53□□□□□ -0.24
USP6NL-205ENST00000609104 TRIM24O15164 1050 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 ANXA9O76027 345 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 COX10Q12887 443 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 KBTBD12Q3ZCT8 623 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 TMC5Q6UXY8 1006 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 USP49Q70CQ1 688 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 SEPT12Q8IYM1 358 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 TMCC3Q9ULS5 477 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 CLPTM1O96005 669 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 NUP107P57740 925 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 PSMC6P62333 389 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 CRYMQ14894 314 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 TSGA10IPQ3SY00 556 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 REXO4Q9GZR2 422 aaKnown RBP13.53□□□□□ -0.24
USP6NL-205ENST00000609104 ELP3Q9H9T3 547 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 ABI2Q9NYB9 513 aaPredicted RBP13.53□□□□□ -0.24
USP6NL-205ENST00000609104 KCND2Q9NZV8 630 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 PNPLA7Q6ZV29 1317 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 ZNF609O15014 1411 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 ZNF682O95780 498 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 PCNAP12004 261 aa13.53□□□□□ -0.24
USP6NL-205ENST00000609104 SGPL1O95470 568 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 PSMA3P25788 255 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 NFYCQ13952 458 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 TERB1Q8NA31 727 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 PLEKHG2Q9H7P9 1386 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 DYNC1LI2O43237 492 aaPredicted RBP13.52□□□□□ -0.24
USP6NL-205ENST00000609104 C4BPBP20851 252 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 TTLL9Q3SXZ7 439 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 NSUN4Q96CB9 384 aaKnown RBP13.52□□□□□ -0.24
USP6NL-205ENST00000609104 TSEN34Q9BSV6 310 aaKnown RBP13.52□□□□□ -0.24
USP6NL-205ENST00000609104 SLC38A7Q9NVC3 462 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.52□□□□□ -0.24
USP6NL-205ENST00000609104 MTSS1O43312 755 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 PBLDP30039 288 aaPredicted RBP13.52□□□□□ -0.24
USP6NL-205ENST00000609104 TRAF2Q12933 501 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 MAPK7Q13164 816 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 TAF2Q6P1X5 1199 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 ST13P5Q8NFI4 369 aaPredicted RBP13.52□□□□□ -0.24
USP6NL-205ENST00000609104 VCPKMTQ9H867 229 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 NMRK1Q9NWW6 199 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 NPTXRO95502 500 aa13.52□□□□□ -0.24
USP6NL-205ENST00000609104 ORC1Q13415 861 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms