RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ARHGAP20Q9P2F6 1191 aa10.23□□□□□ -0.77
DDX39A-220ENST00000593008 CYTH4Q9UIA0 394 aa10.23□□□□□ -0.77
DDX39A-220ENST00000593008 TSPAN16Q9UKR8 245 aa10.23□□□□□ -0.77
DDX39A-220ENST00000593008 DSEQ9UL01 958 aa10.23□□□□□ -0.77
DDX39A-220ENST00000593008 CDH9Q9ULB4 789 aa10.23□□□□□ -0.77
DDX39A-220ENST00000593008 LUC7L2Q9Y383 392 aaKnown RBP10.23□□□□□ -0.77
DDX39A-220ENST00000593008 CLUHO75153 1309 aa10.23□□□□□ -0.77
DDX39A-220ENST00000593008 ARHGEF37A1IGU5 675 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 OR6C75A6NL08 312 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 AKR1B15C9JRZ8 316 aaPredicted RBP10.22□□□□□ -0.77
DDX39A-220ENST00000593008 M0QYV0 167 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 GABBR2O75899 941 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 C1RP00736 705 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 ATF6P18850 670 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 BDNFP23560 247 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 PCSK1P29120 753 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 GBP2P32456 591 aaPredicted RBP10.22□□□□□ -0.77
DDX39A-220ENST00000593008 ELF1P32519 619 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 RGS7P49802 495 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 TSPY1Q01534 308 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 FMO1Q01740 532 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 PTK2Q05397 1052 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 ADCY1Q08828 1119 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 C2CD6Q53TS8 623 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 TMEM31Q5JXX7 168 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 OTOP3Q7RTS5 596 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.22□□□□□ -0.77
DDX39A-220ENST00000593008 UNC93AQ86WB7 457 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 TMEM139Q8IV31 216 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 CRYBG2Q8N1P7 616 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 THEM5Q8N1Q8 247 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 C1orf131Q8NDD1 294 aaKnown RBP10.22□□□□□ -0.77
DDX39A-220ENST00000593008 ZMIZ2Q8NF64 920 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 SECISBP2LQ93073 1101 aaKnown RBP10.22□□□□□ -0.77
DDX39A-220ENST00000593008 PDLIM2Q96JY6 352 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 MYADMQ96S97 322 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 KCNK16Q96T55 309 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 SEPT5Q99719 369 aaPredicted RBP10.22□□□□□ -0.77
DDX39A-220ENST00000593008 SMOQ99835 787 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 LRFN3Q9BTN0 628 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 MED10Q9BTT4 135 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 NUP58Q9BVL2 599 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 HAUS4Q9H6D7 363 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 TAS2R14Q9NYV8 317 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 RAPGEFL1Q9UHV5 662 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.22□□□□□ -0.77
DDX39A-220ENST00000593008 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.22□□□□□ -0.771e-9■■■□□ 17
DDX39A-220ENST00000593008 PTPRDP23468 1912 aa10.22□□□□□ -0.77
DDX39A-220ENST00000593008 SOWAHDA6NJG2 315 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 XYLBO75191 536 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 ABLIM3O94929 683 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 PAEPP09466 180 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 HNRNPA1P09651 372 aaKnown RBP eCLIP10.21□□□□□ -0.77
DDX39A-220ENST00000593008 ATF2P15336 505 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 FERP16591 822 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 FSHRP23945 695 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 PDE6CP51160 858 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 YWHAEP62258 255 aaKnown RBP10.21□□□□□ -0.77
DDX39A-220ENST00000593008 ZXDAP98168 799 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 DUSP4Q13115 394 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 GPR17Q13304 367 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 MTMR3Q13615 1198 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 TRIM14Q14142 442 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 DDR2Q16832 855 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 SGO2Q562F6 1265 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 TDRD12Q587J7 1177 aaKnown RBP10.21□□□□□ -0.77
DDX39A-220ENST00000593008 CYP26C1Q6V0L0 522 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 PHLDB2Q86SQ0 1253 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 ZDHHC14Q8IZN3 488 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 WDTC1Q8N5D0 677 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 ITFG1Q8TB96 612 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 ZNF606Q8WXB4 792 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 RSAD2Q8WXG1 361 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 NDRG1Q92597 394 aaKnown RBP10.21□□□□□ -0.77
DDX39A-220ENST00000593008 EDAQ92838 391 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 ACSF2Q96CM8 615 aaPredicted RBP10.21□□□□□ -0.77
DDX39A-220ENST00000593008 CYFIP2Q96F07 1278 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 ZNF830Q96NB3 372 aaPredicted RBP10.21□□□□□ -0.77
DDX39A-220ENST00000593008 DNAI2Q9GZS0 605 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 KCNF1Q9H3M0 494 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 SPTLC3Q9NUV7 552 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 CHORDC1Q9UHD1 332 aaPredicted RBP10.21□□□□□ -0.77
DDX39A-220ENST00000593008 TFR2Q9UP52 801 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 USTQ9Y2C2 406 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 YIPF1Q9Y548 306 aa10.21□□□□□ -0.77
DDX39A-220ENST00000593008 A0A0U1RQJ8 604 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 TMCO5BA8MYB1 307 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 F8VP50 259 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 DDX3XO00571 662 aaKnown RBP eCLIP10.2□□□□□ -0.78
DDX39A-220ENST00000593008 GPR37L1O60883 481 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 AP1G2O75843 785 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 GJB6O95452 261 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 LRG1P02750 347 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 VDRP11473 427 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 HOXA9P31269 272 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 EIF4A3P38919 411 aaKnown RBP10.2□□□□□ -0.78
DDX39A-220ENST00000593008 PGFP49763 221 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 MAP3K7CLP57077 242 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 USP46P62068 366 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 PDE4CQ08493 712 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms