RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 KCNK5O95279 499 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 GRIK1P39086 918 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 STAT6P42226 847 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 AMPD2Q01433 879 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 CYP27A1Q02318 531 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 FBXO43Q4G163 708 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 RNF43Q68DV7 783 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 USP33Q8TEY7 942 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 ATP2A3Q93084 1043 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 PCED1BQ96HM7 432 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 DPEP3Q9H4B8 488 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 TMEM206Q9H813 350 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 VPS45Q9NRW7 570 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 SMPD4Q9NXE4 827 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 CDH9Q9ULB4 789 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 ARHGAP26Q9UNA1 814 aa12.43□□□□□ -0.42
LIG3-207ENST00000586119 ASCC3Q8N3C0 2202 aaKnown RBP12.43□□□□□ -0.42
LIG3-207ENST00000586119 BCLAF3A2AJT9 711 aaKnown RBP12.42□□□□□ -0.42
LIG3-207ENST00000586119 C4orf47A7E2U8 309 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 CLDN5O00501 218 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 CLIC2O15247 247 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 AKAP3O75969 853 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 APBB3O95704 486 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 CAVIN2O95810 425 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 TOP3BO95985 862 aaKnown RBP12.42□□□□□ -0.42
LIG3-207ENST00000586119 ABL1P00519 1130 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 PCSK1P29120 753 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 CASP1P29466 404 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 GBP1P32455 592 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 MAGEA11P43364 429 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 KCNB1Q14721 858 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 MDH1BQ5I0G3 518 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 PSAPL1Q6NUJ1 521 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 TMEM92Q6UXU6 159 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 CCDC73Q6ZRK6 1079 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 FILIP1Q7Z7B0 1213 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 C12orf40Q86WS4 652 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 TTC30AQ86WT1 665 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 ADGRG2Q8IZP9 1017 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 RLN3Q8WXF3 142 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 ZNF516Q92618 1163 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 INTS4Q96HW7 963 aaKnown RBP12.42□□□□□ -0.42
LIG3-207ENST00000586119 FUBP3Q96I24 572 aaKnown RBP eCLIP12.42□□□□□ -0.42
LIG3-207ENST00000586119 ANKRD36BP1Q96IX9 119 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 MMS19Q96T76 1030 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 HSPBP1Q9NZL4 362 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 EBF1Q9UH73 591 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 MTMR6Q9Y217 621 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 PCDHGA5Q9Y5G8 931 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 USP24Q9UPU5 2620 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 ADAMTS9Q9P2N4 1935 aa12.42□□□□□ -0.42
LIG3-207ENST00000586119 CEP192Q8TEP8 1941 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 ZNF840PA6NDX5 716 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 ZNF233A6NK53 670 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 F8VP50 259 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 FOXD2O60548 495 aaPredicted RBP12.41□□□□□ -0.42
LIG3-207ENST00000586119 RHOBTB1O94844 696 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 TNNC2P02585 160 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 CYP17A1P05093 508 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 CHRM1P11229 460 aaPredicted RBP12.41□□□□□ -0.42
LIG3-207ENST00000586119 SPINK2P20155 84 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 WARSP23381 471 aaKnown RBP12.41□□□□□ -0.42
LIG3-207ENST00000586119 GNL1P36915 607 aaPredicted RBP12.41□□□□□ -0.42
LIG3-207ENST00000586119 IFRD2Q12894 506 aaPredicted RBP12.41□□□□□ -0.42
LIG3-207ENST00000586119 TAF10Q12962 218 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 BECN1Q14457 450 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 SLC39A14Q15043 492 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 DHCR24Q15392 516 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 DUOXA2Q1HG44 320 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 ANO7Q6IWH7 933 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 C4orf50Q6ZRC1 276 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 DENND5BQ6ZUT9 1274 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 DPH6Q7L8W6 267 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 HS2ST1Q7LGA3 356 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 TRAPPC11Q7Z392 1133 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 FSIP1Q8NA03 581 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 MDGA1Q8NFP4 955 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 TSTD1Q8NFU3 115 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 OR6B3Q8NGW1 331 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 DDX1Q92499 740 aaKnown RBP12.41□□□□□ -0.42
LIG3-207ENST00000586119 WBP2Q969T9 261 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 SPATA17Q96L03 361 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 EDEM2Q9BV94 578 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 GZF1Q9H116 711 aaPredicted RBP12.41□□□□□ -0.42
LIG3-207ENST00000586119 TRPM5Q9NZQ8 1165 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 TFIP11Q9UBB9 837 aaKnown RBP12.41□□□□□ -0.42
LIG3-207ENST00000586119 ANGPTL2Q9UKU9 493 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 CPQQ9Y646 472 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 PCNX2A6NKB5 2137 aa12.41□□□□□ -0.42
LIG3-207ENST00000586119 MYH10P35580 1976 aa12.4□□□□□ -0.42
LIG3-207ENST00000586119 CDX4O14627 284 aaPredicted RBP12.4□□□□□ -0.42
LIG3-207ENST00000586119 TGFB1I1O43294 461 aa12.4□□□□□ -0.42
LIG3-207ENST00000586119 DLATP10515 647 aaKnown RBP12.4□□□□□ -0.42
LIG3-207ENST00000586119 TCF3P15923 654 aa12.4□□□□□ -0.42
LIG3-207ENST00000586119 TIE1P35590 1138 aa12.4□□□□□ -0.42
LIG3-207ENST00000586119 TXLNAP40222 546 aa12.4□□□□□ -0.42
LIG3-207ENST00000586119 IRX4P78413 519 aa12.4□□□□□ -0.42
LIG3-207ENST00000586119 MYO1EQ12965 1108 aa12.4□□□□□ -0.42
LIG3-207ENST00000586119 NR1H3Q13133 447 aa12.4□□□□□ -0.42
LIG3-207ENST00000586119 ELF2Q15723 593 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms