RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 OTOP1Q7RTM1 612 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 POLNQ7Z5Q5 900 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 ZNF554Q86TJ5 538 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 SLF2Q8IX21 1173 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 RNF148Q8N7C7 305 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 FAM71DQ8N9W8 422 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 LRGUKQ96M69 825 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 MCEEQ96PE7 176 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 FIZ1Q96SL8 496 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 PCDHGB4Q9UN71 923 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 DOLKQ9UPQ8 538 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 PCDHGB5Q9Y5G0 923 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 KBTBD13C9JR72 458 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 TOP3BO95985 862 aaKnown RBP12.63□□□□□ -0.39
VDR-208ENST00000550325 SRGAP2CP0DJJ0 459 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 SRGAP2BP0DMP2 458 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 SNHG28P0DPA3 235 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 ADSSP30520 456 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 SERPINB8P50452 374 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 PSMC5P62195 406 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 SFSWAPQ12872 951 aaKnown RBP12.63□□□□□ -0.39
VDR-208ENST00000550325 KRT81Q14533 505 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 WDR44Q5JSH3 913 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 C1orf220Q5T0J3 134 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 MAP3K21Q5TCX8 1036 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 TXNRD3NBQ6F5E7 133 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 DUS1LQ6P1R4 473 aaKnown RBP12.63□□□□□ -0.39
VDR-208ENST00000550325 EXD1Q8NHP7 514 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 ACSS3Q9H6R3 686 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 MRPL47Q9HD33 250 aaKnown RBP12.63□□□□□ -0.39
VDR-208ENST00000550325 KCNK4Q9NYG8 393 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 PSTPIP1O43586 416 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 FAXCQ5TGI0 409 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 MROH9Q5TGP6 573 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 CC2D2BQ6DHV5 1058 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 ZFP28Q8NHY6 868 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 HELQQ8TDG4 1101 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 DCAKDQ8WVC6 231 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 WDR18Q9BV38 432 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 Q9H521 79 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 APOBEC2Q9Y235 224 aaKnown RBP12.63□□□□□ -0.39
VDR-208ENST00000550325 STK24Q9Y6E0 443 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 MYH11P35749 1972 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 ANKRD36CQ5JPF3 1778 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 COL18A1P39060 1754 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 TTLL13PA6NNM8 815 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 H3BSA7 217 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 PCSK6P29122 969 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 COPAP53621 1224 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 VCPP55072 806 aaKnown RBP12.62□□□□□ -0.39
VDR-208ENST00000550325 C16orf72Q14CZ0 275 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 ZBTB46Q86UZ6 589 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 PPIL6Q8IXY8 311 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 FAM81BQ96LP2 452 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 UNC45AQ9H3U1 944 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 USP29Q9HBJ7 922 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 STRIP2Q9ULQ0 834 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 SHOC2Q9UQ13 582 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 DAGLAQ9Y4D2 1042 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 MAD1L1Q9Y6D9 718 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 A0A088AWK7 358 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 ARHGAP10A1A4S6 786 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 G3V3G9 751 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 VILLO15195 856 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 TBC1D12O60347 775 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 FOSP01100 380 aaPredicted RBP12.62□□□□□ -0.39
VDR-208ENST00000550325 CDK4P11802 303 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 DSG3P32926 999 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 SREBF1P36956 1147 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 ALDH1A3P47895 512 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 OTUD4Q01804 1114 aaKnown RBP12.62□□□□□ -0.39
VDR-208ENST00000550325 STX3Q13277 289 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 PDK1Q15118 436 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 TLR1Q15399 786 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 C1QTNF12Q5T7M4 302 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 DCAF8Q5TAQ9 597 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 TMCO4Q5TGY1 634 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 DPY19L2Q6NUT2 758 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 MIER3Q7Z3K6 550 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 RELL1Q8IUW5 271 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 ZNF276Q8N554 614 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 ACTL9Q8TC94 416 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 TEKT1Q969V4 418 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 CCDC28BQ9BUN5 200 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 TUFT1Q9NNX1 390 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 NDUFA13Q9P0J0 144 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 TRPC5Q9UL62 973 aaPredicted RBP12.62□□□□□ -0.39
VDR-208ENST00000550325 RREB1Q92766 1687 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 ATRNL1Q5VV63 1379 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 IPO5O00410 1097 aaKnown RBP12.62□□□□□ -0.39
VDR-208ENST00000550325 OATP04181 439 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 ARP10275 920 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 MYLK3Q32MK0 819 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 BRDTQ58F21 947 aaPredicted RBP12.62□□□□□ -0.39
VDR-208ENST00000550325 GRAMD4Q6IC98 578 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 SPOCD1Q6ZMY3 1216 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 SV2AQ7L0J3 742 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 AMIGO2Q86SJ2 522 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 KATNAL2Q8IYT4 538 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms