RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 CACTINQ8WUQ7 758 aaKnown RBP17.62■□□□□ 0.41
SSH1-208ENST00000548522 HPS3Q969F9 1004 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 FUBP3Q96I24 572 aaKnown RBP eCLIP17.62■□□□□ 0.41
SSH1-208ENST00000548522 OLFML3Q9NRN5 406 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 AKAP13Q12802 2813 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 FRMD3A2A2Y4 597 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 C1QTNF9BB2RNN3 333 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 LEFTY2O00292 366 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 CYP17A1P05093 508 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 C1QTNF9P0C862 333 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 CHRM1P11229 460 aaPredicted RBP17.61■□□□□ 0.41
SSH1-208ENST00000548522 MAGEA11P43364 429 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 LHX1P48742 406 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 CEBPZQ03701 1054 aaKnown RBP17.61■□□□□ 0.41
SSH1-208ENST00000548522 SV2BQ7L1I2 683 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 LIMS2Q7Z4I7 341 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 RASSF3Q86WH2 238 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 CBWD2Q8IUF1 395 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 ZDHHC4Q9NPG8 344 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 TMEM30AQ9NV96 361 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 INTS13Q9NVM9 706 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 SMPD4Q9NXE4 827 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 CCDC39Q9UFE4 941 aa17.61■□□□□ 0.41
SSH1-208ENST00000548522 NFATC1O95644 943 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 TOP3BO95985 862 aaKnown RBP17.6■□□□□ 0.41
SSH1-208ENST00000548522 PDGFRBP09619 1106 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 TCF3P15923 654 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 CACNA2D1P54289 1103 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 CYP27A1Q02318 531 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 ZNF252P-AS1Q0IIN9 211 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 TMEM92Q6UXU6 159 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 FILIP1Q7Z7B0 1213 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 C12orf40Q86WS4 652 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 TTC30AQ86WT1 665 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 HSCBQ8IWL3 235 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 GPD1LQ8N335 351 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 FSIP1Q8NA03 581 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 SPATA18Q8TC71 538 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 EXOC4Q96A65 974 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 PCED1BQ96HM7 432 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 HPDLQ96IR7 371 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 PANK2Q9BZ23 570 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 RNF38Q9H0F5 515 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.6■□□□□ 0.41
SSH1-208ENST00000548522 PCDHB13Q9Y5F0 798 aa17.6■□□□□ 0.41
SSH1-208ENST00000548522 SRPRBQ9Y5M8 271 aaKnown RBP17.6■□□□□ 0.41
SSH1-208ENST00000548522 ABCA7Q8IZY2 2146 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 ANAPC1Q9H1A4 1944 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 LDHAP00338 332 aaKnown RBP17.59■□□□□ 0.41
SSH1-208ENST00000548522 GRIK1P39086 918 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 SLC6A11P48066 632 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 FOXC1Q12948 553 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 RESTQ13127 1097 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 SH3PXD2AQ5TCZ1 1133 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 C4orf50Q6ZRC1 276 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 DENND5BQ6ZUT9 1274 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 FRMD1Q8N878 549 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 RLN3Q8WXF3 142 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 ANKRD36BP1Q96IX9 119 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 SPATA17Q96L03 361 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 CNOT6LQ96LI5 555 aaKnown RBP17.59■□□□□ 0.41
SSH1-208ENST00000548522 MRPL45Q9BRJ2 306 aaKnown RBP17.59■□□□□ 0.41
SSH1-208ENST00000548522 PANK4Q9NVE7 773 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 MAGEC2Q9UBF1 373 aaPredicted RBP17.59■□□□□ 0.41
SSH1-208ENST00000548522 CDH9Q9ULB4 789 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 MMP17Q9ULZ9 603 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 WASF3Q9UPY6 502 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 CPQQ9Y646 472 aa17.59■□□□□ 0.41
SSH1-208ENST00000548522 ZNF840PA6NDX5 716 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 F8VP50 259 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 CDX4O14627 284 aaPredicted RBP17.58■□□□□ 0.4
SSH1-208ENST00000548522 HOXD13P35453 343 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 STAT6P42226 847 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 MYO1EQ12965 1108 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 NR1H3Q13133 447 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 CRY1Q16526 586 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 USP39Q53GS9 565 aaKnown RBP17.58■□□□□ 0.4
SSH1-208ENST00000548522 MDH1BQ5I0G3 518 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 VSTM1Q6UX27 236 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 ARMCX6Q7L4S7 300 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 CYP2U1Q7Z449 544 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 ALLCQ8N6M5 410 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 TTLL2Q9BWV7 592 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 DPEP3Q9H4B8 488 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 TRPM5Q9NZQ8 1165 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 HELZP42694 1942 aaKnown RBP17.58■□□□□ 0.4
SSH1-208ENST00000548522 FAM208BQ5VWN6 2430 aa17.58■□□□□ 0.4
SSH1-208ENST00000548522 SGK1O00141 431 aa17.57■□□□□ 0.4
SSH1-208ENST00000548522 OLFM2O95897 454 aa17.57■□□□□ 0.4
SSH1-208ENST00000548522 PROS1P07225 676 aa17.57■□□□□ 0.4
SSH1-208ENST00000548522 WARSP23381 471 aaKnown RBP17.57■□□□□ 0.4
SSH1-208ENST00000548522 TXLNAP40222 546 aa17.57■□□□□ 0.4
SSH1-208ENST00000548522 DHPSP49366 369 aaPredicted RBP17.57■□□□□ 0.4
SSH1-208ENST00000548522 IRX4P78413 519 aa17.57■□□□□ 0.4
SSH1-208ENST00000548522 EMC10Q5UCC4 262 aa17.57■□□□□ 0.4
SSH1-208ENST00000548522 UNQ6494/PRO21346Q6UXR6 183 aa17.57■□□□□ 0.4
SSH1-208ENST00000548522 TXNDC5Q8NBS9 432 aaKnown RBP17.57■□□□□ 0.4
SSH1-208ENST00000548522 TMEM9BQ9NQ34 198 aa17.57■□□□□ 0.4
SSH1-208ENST00000548522 CFAP97Q9P2B7 532 aa17.57■□□□□ 0.4
SSH1-208ENST00000548522 CIZ1Q9ULV3 898 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms