RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 ZNF541Q9H0D2 1346 aa9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 LIASO43766 372 aa9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 ZC3H11AO75152 810 aaKnown RBP eCLIP9.9□□□□□ -0.823e-6■□□□□ 10.7
CALCOCO1-210ENST00000548263 TYK2P29597 1187 aa9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 TMEM62Q0P6H9 643 aa9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 CYP1B1Q16678 543 aa9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 IRGCQ6NXR0 463 aa9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 RSPH3Q86UC2 560 aa9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 APOBEC3FQ8IUX4 373 aaKnown RBP9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 C4orf19Q8IY42 314 aa9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 LPAR1Q92633 364 aa9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 PPWD1Q96BP3 646 aaKnown RBP9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 CLMNQ96JQ2 1002 aa9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 ZBTB45Q96K62 511 aaPredicted RBP9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 RPF1Q9H9Y2 349 aaKnown RBP9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 AKT3Q9Y243 479 aa9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 CHD4Q14839 1912 aa9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 ADAMTS7Q9UKP4 1686 aa9.9□□□□□ -0.82
CALCOCO1-210ENST00000548263 ADGRA3Q8IWK6 1321 aa9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 TM9SF1O15321 606 aa9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 PSMG1O95456 288 aa9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 GARTP22102 1010 aa9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 ATXN3P54252 364 aaPredicted RBP9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 HADHBP55084 474 aaKnown RBP9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 ART3Q13508 389 aa9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 XKR3Q5GH77 459 aa9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 TTC39BQ5VTQ0 682 aaPredicted RBP9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 FAM160B1Q5W0V3 765 aa9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 ZC3H3Q8IXZ2 948 aaKnown RBP9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 MAB21L3Q8N8X9 362 aa9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 OLFM3Q96PB7 478 aa9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 COL20A1Q9P218 1284 aa9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 PDP2Q9P2J9 529 aa9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 NKX1-2Q9UD57 310 aaPredicted RBP9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 FAF1Q9UNN5 650 aaPredicted RBP9.9□□□□□ -0.83
CALCOCO1-210ENST00000548263 IGLV3-22A0A075B6J6 115 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 FAM237BA0A1B0GVD1 139 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 GSTA2P09210 222 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 YY1P25490 414 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 TGFB2P61812 414 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 DSG1Q02413 1049 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 C1QBPQ07021 282 aaKnown RBP9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 TMED1Q13445 227 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 EMC2Q15006 297 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 DBN1Q16643 649 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 ZNF568Q3ZCX4 644 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 FAM47CQ5HY64 1035 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 CLNKQ7Z7G1 428 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 OXNAD1Q96HP4 312 aaPredicted RBP9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 L3MBTL3Q96JM7 780 aaPredicted RBP9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 MBOAT7Q96N66 472 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 ARL8BQ9NVJ2 186 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 SLC5A4Q9NY91 659 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 WRAP73Q9P2S5 460 aaPredicted RBP9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 UBR2Q8IWV8 1755 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 C2CD2LO14523 706 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 EDIL3O43854 480 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 ARL1P40616 181 aaPredicted RBP9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 RGS7P49802 495 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 NLRP11P59045 1033 aaKnown RBP9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 CDK16Q00536 496 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 SURF1Q15526 300 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 NFIL3Q16649 462 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 KHDC1Q4VXA5 237 aaKnown RBP9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 ANO5Q75V66 913 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 ZNF354CQ86Y25 554 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 CCDC33Q8N5R6 958 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 CEP120Q8N960 986 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 RFWD2Q8NHY2 731 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 HELQQ8TDG4 1101 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 NLRP7Q8WX94 980 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 PDCD2LQ9BRP1 358 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 DHX35Q9H5Z1 703 aaKnown RBP9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 NMRK1Q9NWW6 199 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 SLC17A7Q9P2U7 560 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 C2orf71A6NGG8 1288 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 KBTBD13C9JR72 458 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 VWA5AO00534 786 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 ABHD2P08910 425 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 TPBGLP0DKB5 382 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 SDC4P31431 198 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 EFTUD2Q15029 972 aaKnown RBP eCLIP9.89□□□□□ -0.831e-7■■■□□ 18.3
CALCOCO1-210ENST00000548263 SGSM1Q2NKQ1 1148 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 KBTBD12Q3ZCT8 623 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 GJC2Q5T442 439 aaPredicted RBP9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 FAM83AQ86UY5 434 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 TMPRSS6Q8IU80 811 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 MAP4K3Q8IVH8 894 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 POU5F2Q8N7G0 328 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 C12orf50Q8NA57 414 aaPredicted RBP9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 TMEM161BQ8NDZ6 487 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 SERPINI1Q99574 410 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 NUF2Q9BZD4 464 aa9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.89□□□□□ -0.83
CALCOCO1-210ENST00000548263 IRS2Q9Y4H2 1338 aa9.88□□□□□ -0.83
CALCOCO1-210ENST00000548263 ARL4AP40617 200 aa9.88□□□□□ -0.83
CALCOCO1-210ENST00000548263 RNF220Q5VTB9 566 aa9.88□□□□□ -0.83
CALCOCO1-210ENST00000548263 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.88□□□□□ -0.83
CALCOCO1-210ENST00000548263 DAW1Q8N136 415 aa9.88□□□□□ -0.83
CALCOCO1-210ENST00000548263 TRIML2Q8N7C3 387 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms