RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 FDFT1P37268 417 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 RGS4P49798 205 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 SPDYAQ5MJ70 313 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 TRIM65Q6PJ69 517 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 FAM71DQ8N9W8 422 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 THOC1Q96FV9 657 aaKnown RBP9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 OSBPL8Q9BZF1 889 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 DMAP1Q9NPF5 467 aaPredicted RBP9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 SPG21Q9NZD8 308 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 TRAV19A0A0A6YYK7 116 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 ATP8B1O43520 1251 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 CD52P31358 61 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 TUFMP49411 452 aaKnown RBP9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 SCNN1GP51170 649 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 CRYBB1P53674 252 aaPredicted RBP9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 CENPCQ03188 943 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 PTPN11Q06124 597 aaPredicted RBP9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 USP10Q14694 798 aaKnown RBP9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 CASP8Q14790 479 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 NAPEPLDQ6IQ20 393 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 PPP4R4Q6NUP7 873 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 EFHD1Q9BUP0 239 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 APOL5Q9BWW9 433 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 THAP2Q9H0W7 228 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 AMACRQ9UHK6 382 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 NCKAP1Q9Y2A7 1128 aa9.4□□□□□ -0.9
MTHFD1-202ENST00000545908 A0A0G2JND7 137 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 SYNDIG1LA6NDD5 238 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 KCNA2P16389 499 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 RHOAP61586 193 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 ITGA7Q13683 1181 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 SLC9A5Q14940 896 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 PDK2Q15119 407 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 TATDN1Q6P1N9 297 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 NUDCD3Q8IVD9 361 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 TMEM86AQ8N2M4 240 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 MTMR14Q8NCE2 650 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 ZNF507Q8TCN5 953 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 LPPQ93052 612 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 GAD1Q99259 594 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 GOLPH3Q9H4A6 298 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 FAM96AQ9H5X1 160 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 TRIM10Q9UDY6 481 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 UBIAD1Q9Y5Z9 338 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 CAPN7Q9Y6W3 813 aa9.4□□□□□ -0.91
MTHFD1-202ENST00000545908 LRRIQ3A6PVS8 624 aaPredicted RBP9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 PLA2G6O60733 806 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 PMPCBO75439 489 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 RHOBTB1O94844 696 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 CSE1LP55060 971 aaKnown RBP9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 EFTUD2Q15029 972 aaKnown RBP eCLIP9.39□□□□□ -0.912e-6■■■■■ 32
MTHFD1-202ENST00000545908 KCNA10Q16322 511 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 BLOC1S5Q8TDH9 187 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 EDEM1Q92611 657 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 ERLEC1Q96DZ1 483 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 ZNF518BQ9C0D4 1074 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 LATS2Q9NRM7 1088 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 TXLNGQ9NUQ3 528 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 KBTBD4Q9NVX7 518 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 ZC3H7BQ9UGR2 993 aaKnown RBP9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 FAM50BQ9Y247 325 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 USP20Q9Y2K6 914 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 SALL3Q9BXA9 1300 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 COL1A2P08123 1366 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 CBX4O00257 560 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 FOXN3O00409 490 aaPredicted RBP9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 NPM3O75607 178 aaKnown RBP9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 NDUFV1P49821 464 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 GABPB1Q06547 395 aaPredicted RBP9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 ZPBP2Q6X784 338 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 LZICQ8WZA0 190 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 MRFAP1Q9Y605 127 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 ZBTB39O15060 712 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 FOXP2O15409 715 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 LSM8O95777 96 aaKnown RBP9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 POLBP06746 335 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 CLNS1AP54105 237 aaKnown RBP9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 PTK6Q13882 451 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 PKN3Q6P5Z2 889 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 VSIG10LQ86VR7 867 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 CCDC33Q8N5R6 958 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 ZBTB45Q96K62 511 aaPredicted RBP9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 TACO1Q9BSH4 297 aaKnown RBP9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 ASB7Q9H672 318 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 OLFML3Q9NRN5 406 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 RNF19AQ9NV58 838 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 TSPAN16Q9UKR8 245 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 SF3B1O75533 1304 aaKnown RBP eCLIP9.39□□□□□ -0.912e-6■■■■■ 43.1
MTHFD1-202ENST00000545908 CYTH3O43739 400 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 DIAPH2O60879 1101 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 SLURP2P0DP57 97 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 BDNFP23560 247 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 C16orf59Q7L2K0 433 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 TAS1R2Q8TE23 839 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 ELMO3Q96BJ8 720 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 PDGFCQ9NRA1 345 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 DDX20Q9UHI6 824 aaKnown RBP9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 USP18Q9UMW8 372 aa9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 AAR2Q9Y312 384 aaKnown RBP9.39□□□□□ -0.91
MTHFD1-202ENST00000545908 SPEF2Q9C093 1822 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms