RNA–Protein interactions for RNA: ENST00000526262.5

PPFIA1-206, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 4,537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-206ENST00000526262 PCDHB18PQ96TA0 734 aa9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 CCDC68Q9H2F9 335 aa9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 WDCPQ9H6R7 721 aa9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 BFARQ9NZS9 450 aa9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 NEU2Q9Y3R4 380 aa9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 IQANK1A0A1B0GTG1 560 aa9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 PFDN6O15212 129 aa9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 ZNF189O75820 626 aaPredicted RBP9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 STIP1P31948 543 aaKnown RBP9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 TARBP2Q15633 366 aaKnown RBP9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 GEN1Q17RS7 908 aa9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 BEND6Q5SZJ8 279 aaPredicted RBP9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 OLFML2BQ68BL8 750 aa9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 ZNF280DQ6N043 979 aa9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 CACNA2D3Q8IZS8 1091 aa9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 CASKIN2Q8WXE0 1202 aa9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 SPON2Q9BUD6 331 aa9.23□□□□□ -0.93
PPFIA1-206ENST00000526262 NCANO14594 1321 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 MYH8P13535 1937 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 TAF1LQ8IZX4 1826 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 F8VP50 259 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 H7C4K7 107 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 DFFAO00273 331 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 KRT37O76014 449 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 CCDC130P13994 396 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 CA4P22748 312 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 EPHB2P29323 1055 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 MAGOHP61326 146 aaKnown RBP9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 YWHAZP63104 245 aaKnown RBP9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 ADIGQ0VDE8 80 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 SEPT6Q14141 434 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 PDK1Q15118 436 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 TAPT1Q6NXT6 567 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 EFCAB13Q8IY85 973 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 RYBPQ8N488 228 aaPredicted RBP9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 LRRC8CQ8TDW0 803 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 TSPAN18Q96SJ8 248 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 FSD1LQ9BXM9 530 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 FOXP3Q9BZS1 431 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 ANKZF1Q9H8Y5 726 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 GPATCH2LQ9NWQ4 482 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 GIT1Q9Y2X7 761 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 Q9Y3F1 56 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 RREB1Q92766 1687 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 PDE2AO00408 941 aaPredicted RBP9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 CNMDO75829 334 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 GLI1P08151 1106 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 HMBSP08397 361 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 TROVE2P10155 538 aaKnown RBP eCLIP9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 PTPN1P18031 435 aaKnown RBP9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 ITGA8P53708 1063 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 THOC5Q13769 683 aaKnown RBP9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 CCNG2Q16589 344 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 KLHL38Q2WGJ6 581 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 SLC10A6Q3KNW5 377 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 SLC39A4Q6P5W5 647 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 TRMT10CQ7L0Y3 403 aaKnown RBP9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 FAM71DQ8N9W8 422 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 C18orf25Q96B23 403 aaPredicted RBP9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 C9orf72Q96LT7 481 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 EIF2AQ9BY44 585 aaKnown RBP9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 TMEM39AQ9NV64 488 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 PAK5Q9P286 719 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 HPCAL4Q9UM19 191 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 SIGLEC16A6NMB1 481 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 TBKBP1A7MCY6 615 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 RASA4BC9J798 803 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 RASA4O43374 803 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 RFC1P35251 1148 aaPredicted RBP9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 SLC6A3Q01959 620 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 SLFN11Q7Z7L1 901 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 VSIG1Q86XK7 387 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 DEPDC1BQ8WUY9 529 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 MINDY3Q9H8M7 445 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 SP110Q9HB58 689 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 L1RE1Q9UN81 338 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 TELO2Q9Y4R8 837 aa9.22□□□□□ -0.93
PPFIA1-206ENST00000526262 DNAJC25-GNG10A0A024R161 153 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 OTUD4Q01804 1114 aaKnown RBP9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 ACAP1Q15027 740 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 SYCP2LQ5T4T6 812 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 C6orf163Q5TEZ5 329 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 C9orf57Q5W0N0 161 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 MAMDC4Q6UXC1 1216 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 RAPH1Q70E73 1250 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 ZC3H3Q8IXZ2 948 aaKnown RBP9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 ARHGAP18Q8N392 663 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 SMARCD1Q96GM5 515 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 ATP6V1G3Q96LB4 118 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 DEFB118Q96PH6 123 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 KLHL14Q9P2G3 628 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 DDX20Q9UHI6 824 aaKnown RBP9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 PADI3Q9ULW8 664 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 AP4E1Q9UPM8 1137 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 AOC2O75106 756 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 STAMBPO95630 424 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 RAG1P15918 1043 aa9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 RPL9P32969 192 aaKnown RBP9.21□□□□□ -0.93
PPFIA1-206ENST00000526262 ALDH1A3P47895 512 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms