RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 KATNBL1Q9H079 304 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 TSPAN16Q9UKR8 245 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 ACTL7BQ9Y614 415 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 PLXNB2O15031 1838 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 RNF8O76064 485 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 TMEM63AO94886 807 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 PFKMP08237 780 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 P4HA1P13674 534 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 FOXN2P32314 431 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 RGS7P49802 495 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 INCA1Q0VD86 236 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 EFTUD2Q15029 972 aaKnown RBP eCLIP11.27□□□□□ -0.61e-5■□□□□ 9
RAB11FIP1-204ENST00000522774 CGB2Q6NT52 195 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 TRPM8Q7Z2W7 1104 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 NAT8LQ8N9F0 302 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 FAM71DQ8N9W8 422 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 GPRC5AQ8NFJ5 357 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 PPP1R13LQ8WUF5 828 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 RSAD2Q8WXG1 361 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 KIF12Q96FN5 646 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 ACAP3Q96P50 834 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 NKIRAS1Q9NYS0 192 aa11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.27□□□□□ -0.6
RAB11FIP1-204ENST00000522774 H3BRB1 525 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 PPEF2O14830 753 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 EPHX2P34913 555 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 EIF3EP60228 445 aaKnown RBP11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 CDO1Q16878 200 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 SMYD5Q6GMV2 418 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 OR6B2Q6IFH4 312 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 ARHGEF18Q6ZSZ5 1173 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 TDRPQ86YL5 185 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 PPIL6Q8IXY8 311 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 TTC13Q8NBP0 860 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 RXFP2Q8WXD0 754 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 TUT1Q9H6E5 874 aaKnown RBP11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 VTA1Q9NP79 307 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 ITGA11Q9UKX5 1188 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 USP15Q9Y4E8 981 aaPredicted RBP11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 A0A1B0GUA9 196 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 FAM47DPA6NHR8 397 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 C2CD4BA6NLJ0 364 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 APOC4-APOC2K7ER74 178 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 SNAI1O95863 264 aaPredicted RBP11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 APOC2P02655 101 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 SSTR1P30872 391 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 ZNF143P52747 638 aaPredicted RBP11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 RBP5P82980 135 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 GRIK4Q16099 956 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 FAM133BQ5BKY9 247 aaKnown RBP11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 LDLRAD1Q5T700 205 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 C4orf33Q8N1A6 199 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 PAIP2Q9BPZ3 127 aaKnown RBP11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 RNF19AQ9NV58 838 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 ASNSD1Q9NWL6 643 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 SLC12A4Q9UP95 1085 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 C2CD2Q9Y426 696 aa11.27□□□□□ -0.61
RAB11FIP1-204ENST00000522774 RBM47A0AV96 593 aaKnown RBP11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 RBP3P10745 1247 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 PDGFRAP16234 1089 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 YBX3P16989 372 aaKnown RBP eCLIP11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 TAC1P20366 129 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 GPD1P21695 349 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 CDH6P55285 790 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 TMEM62Q0P6H9 643 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 KIZQ2M2Z5 673 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 GOLGA7BQ2TAP0 167 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 LCLAT1Q6UWP7 414 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 USP50Q70EL3 339 aaPredicted RBP11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 MAGEB18Q96M61 343 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 TRABDQ9H4I3 376 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 UBN1Q9NPG3 1134 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 GINS2Q9Y248 185 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 NME7Q9Y5B8 376 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 COL1A2P08123 1366 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 A0A1W2PPM1 405 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 PDHXO00330 501 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 KRT15P19012 456 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 PCK1P35558 622 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 SYCP2LQ5T4T6 812 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 PPP1R26Q5T8A7 1209 aaPredicted RBP11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 PPP1R21Q6ZMI0 780 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 FUKQ8N0W3 1084 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 SPATA18Q8TC71 538 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 EMID1Q96A84 441 aaPredicted RBP11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 SLC10A4Q96EP9 437 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 ZMAT2Q96NC0 199 aaKnown RBP11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 MRPL45Q9BRJ2 306 aaKnown RBP11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 CNPY3Q9BT09 278 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 NT5C1AQ9BXI3 368 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 FRMD8P1Q9BZ68 369 aaPredicted RBP11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 KLC4Q9NSK0 619 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 GPATCH2LQ9NWQ4 482 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 RABGEF1Q9UJ41 708 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 GRID1Q9ULK0 1009 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 KAT6AQ92794 2004 aa11.26□□□□□ -0.61
RAB11FIP1-204ENST00000522774 MCF2LO15068 1137 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms