RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 ALG3Q92685 438 aa13.27□□□□□ -0.29
LYSMD3-204ENST00000509384 TOP1MTQ969P6 601 aa13.27□□□□□ -0.29
LYSMD3-204ENST00000509384 SMARCAL1Q9NZC9 954 aa13.27□□□□□ -0.29
LYSMD3-204ENST00000509384 USTQ9Y2C2 406 aa13.27□□□□□ -0.29
LYSMD3-204ENST00000509384 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.27□□□□□ -0.29
LYSMD3-204ENST00000509384 PCDHA3Q9Y5H8 950 aa13.27□□□□□ -0.29
LYSMD3-204ENST00000509384 PGRMC1O00264 195 aaKnown RBP13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 PAPSS1O43252 624 aaPredicted RBP13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 BAIAP3O94812 1187 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 OAZ2O95190 189 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 ACRP10323 421 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 LCP1P13796 627 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 PSMA2P25787 234 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 PBX3P40426 434 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 RPL34P49207 117 aaKnown RBP13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 CDR1P51861 262 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 RWDD2BP57060 319 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 MAP3K7CLP57077 242 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 WDR5P61964 334 aaKnown RBP13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 DEFB103AP81534 67 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 SLC6A3Q01959 620 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 OGDHQ02218 1023 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 ELF2Q15723 593 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 DCAF12L1Q5VU92 463 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 FUT10Q6P4F1 479 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 CLEC20AQ6ZU45 233 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 PIGZQ86VD9 579 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 EMC1Q8N766 993 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 NIPA2Q8N8Q9 360 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 ACTRT1Q8TDG2 376 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 SMARCD1Q96GM5 515 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 PIWIL1Q96J94 861 aaKnown RBP13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 TMEM209Q96SK2 561 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 PKMYT1Q99640 499 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 IL23AQ9NPF7 189 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 KIAA0100Q14667 2235 aaKnown RBP13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 TTC3P53804 2025 aa13.26□□□□□ -0.29
LYSMD3-204ENST00000509384 NT5C1B-RDH14C9J2C7 533 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 PSTPIP1O43586 416 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 GABBR2O75899 941 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 BEST1O76090 585 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 TUBBP07437 444 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 SCNN1AP37088 669 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 ALDH7A1P49419 539 aaKnown RBP13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 PEX5P50542 639 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 RNASE9P60153 205 aaKnown RBP13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 ZNF211Q13398 564 aaPredicted RBP13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 PPIGQ13427 754 aaKnown RBP eCLIP13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 VARS2Q5ST30 1063 aaKnown RBP13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 SEL1L2Q5TEA6 688 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 FAM171A1Q5VUB5 890 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 DAB2IPQ5VWQ8 1189 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 FAM117BQ6P1L5 589 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 C4orf50Q6ZRC1 276 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 RSRC2Q7L4I2 434 aaKnown RBP13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 CEP57Q86XR8 500 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 SCUBE3Q8IX30 993 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 RHOT1Q8IXI2 618 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 DCP1BQ8IZD4 617 aaKnown RBP13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 SIX6OS1Q8N1H7 587 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 RASGEF1CQ8N431 466 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 SPATA4Q8NEY3 305 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 KCTD13Q8WZ19 329 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 RNPC3Q96LT9 517 aaKnown RBP13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 PLVAPQ9BX97 442 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 GPR62Q9BZJ7 368 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 LRRC4Q9HBW1 653 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 TMLHEQ9NVH6 421 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 TSC2P49815 1807 aa13.25□□□□□ -0.29
LYSMD3-204ENST00000509384 F8VP50 259 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 GRAP2O75791 330 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 GPD1P21695 349 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 FGFR3P22607 806 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 GJC1P36383 396 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 ITIH3Q06033 890 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 C2orf54Q08AI8 447 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 ADIGQ0VDE8 80 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 NAA30Q147X3 362 aaPredicted RBP13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 CLUL1Q15846 466 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 ERCC6LQ2NKX8 1250 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 CTXN3Q4LDR2 81 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 SLC39A12Q504Y0 691 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 SPOUT1Q5T280 376 aaKnown RBP13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 ZNF280DQ6N043 979 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 CC2D1AQ6P1N0 951 aaPredicted RBP13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 SLC26A9Q7LBE3 791 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 LRRTM3Q86VH5 581 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 SPATA2LQ8IUW3 424 aaPredicted RBP13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 GPR161Q8N6U8 529 aaKnown RBP13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 NAP1L3Q99457 506 aaPredicted RBP13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 SMOQ99835 787 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 RHOBTB2Q9BYZ6 727 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 ZCWPW1Q9H0M4 648 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 CWH43Q9H720 699 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 TMEM59LQ9UK28 342 aa13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 TTC7AQ9ULT0 858 aaPredicted RBP13.24□□□□□ -0.29
LYSMD3-204ENST00000509384 OR6C75A6NL08 312 aa13.23□□□□□ -0.29
LYSMD3-204ENST00000509384 C2CD4BA6NLJ0 364 aa13.23□□□□□ -0.29
LYSMD3-204ENST00000509384 ZBBXA8MT70 800 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms