RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 PEBP4Q96S96 227 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 CXCL16Q9H2A7 254 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 RSAD1Q9HA92 442 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 DDX20Q9UHI6 824 aaKnown RBP13.68□□□□□ -0.22
GARNL3-220ENST00000496711 GNEQ9Y223 722 aaKnown RBP13.68□□□□□ -0.22
GARNL3-220ENST00000496711 TRPM7Q96QT4 1865 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 PIK3R2O00459 728 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 CELF2O95319 508 aaKnown RBP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 DARSP14868 501 aaKnown RBP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 RDXP35241 583 aaKnown RBP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 MFSD10Q14728 455 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 TAF5Q15542 800 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 ZBTB6Q15916 424 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 PPP1R26Q5T8A7 1209 aaPredicted RBP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 GKAP1Q5VSY0 366 aaPredicted RBP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 TRNP1Q6NT89 227 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 TLK2Q86UE8 772 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 CACNA2D3Q8IZS8 1091 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 C12orf29Q8N999 325 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 RXFP2Q8WXD0 754 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 PRCCQ92733 491 aaPredicted RBP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 KAT2BQ92831 832 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 PIWIL1Q96J94 861 aaKnown RBP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 ZNF317Q96PQ6 595 aaPredicted RBP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 CALN1Q9BXU9 219 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 TRIM6Q9C030 488 aaPredicted RBP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 NXF3Q9H4D5 531 aaKnown RBP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 CNTN3Q9P232 1028 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 SAE1Q9UBE0 346 aaPredicted RBP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 DPYSL4O14531 572 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 MCF2LO15068 1137 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 RECQL4O94761 1208 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 PDGFRAP16234 1089 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 GDF10P55107 478 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 MAP2K5Q13163 448 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 PKDCCQ504Y2 493 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 GLRA4Q5JXX5 417 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 MORN1Q5T089 497 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 CENPUQ71F23 418 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 TADA2BQ86TJ2 420 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 ACOT1Q86TX2 421 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 RSAD2Q8WXG1 361 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 PPM1EQ8WY54 764 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 SEC16BQ96JE7 1060 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 PRMT1Q99873 361 aaKnown RBP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 PHACTR1Q9C0D0 580 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 CDHR5Q9HBB8 845 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 EURLQ9NYK6 297 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 HESX1Q9UBX0 185 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 UBQLN1Q9UMX0 589 aaKnown RBP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 FARP1Q9Y4F1 1045 aaPredicted RBP13.67□□□□□ -0.22
GARNL3-220ENST00000496711 HES2Q9Y543 173 aa13.67□□□□□ -0.22
GARNL3-220ENST00000496711 TMEM120BA0PK00 339 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 ENDOD1O94919 500 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 AXLP30530 894 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 CTCFP49711 727 aaPredicted RBP13.66□□□□□ -0.22
GARNL3-220ENST00000496711 RGS7P49802 495 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 CDH6P55285 790 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 IRX5P78411 483 aaPredicted RBP13.66□□□□□ -0.22
GARNL3-220ENST00000496711 CCDC142Q17RM4 750 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 C15orf59Q2T9L4 293 aaPredicted RBP13.66□□□□□ -0.22
GARNL3-220ENST00000496711 PRAMEF19Q5SWL8 479 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 C9orf57Q5W0N0 161 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 C6orf89Q6UWU4 347 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 OLFML1Q6UWY5 402 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 VSTM1Q6UX27 236 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 CYP4V2Q6ZWL3 525 aaPredicted RBP13.66□□□□□ -0.22
GARNL3-220ENST00000496711 SESTD1Q86VW0 696 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 UNC93AQ86WB7 457 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 TTC30AQ86WT1 665 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 PPIL6Q8IXY8 311 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 OTUD6BQ8N6M0 293 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 C18orf25Q96B23 403 aaPredicted RBP13.66□□□□□ -0.22
GARNL3-220ENST00000496711 FAM49BQ9NUQ9 324 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 CPA4Q9UI42 421 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 NME7Q9Y5B8 376 aa13.66□□□□□ -0.22
GARNL3-220ENST00000496711 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.66□□□□□ -0.22
GARNL3-220ENST00000496711 EXOC1LA0A1B0GW35 172 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 PRPSAP2O60256 369 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 GRAP2O75791 330 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 PSEN2P49810 448 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 SNX16P57768 344 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 EIF3EP60228 445 aaKnown RBP13.65□□□□□ -0.22
GARNL3-220ENST00000496711 PDE4CQ08493 712 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 IFT88Q13099 833 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 CDO1Q16878 200 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 SH3PXD2AQ5TCZ1 1133 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 OLFML2BQ68BL8 750 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 PMF1Q6P1K2 205 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 ALKAL1Q6UXT8 129 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 ZBED8Q8IZ13 594 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 PPP1R13LQ8WUF5 828 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 LENG1Q96BZ8 264 aaPredicted RBP13.65□□□□□ -0.22
GARNL3-220ENST00000496711 CABS1Q96KC9 395 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 APOL6Q9BWW8 343 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 SLC4A5Q9BY07 1137 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 NSRP1Q9H0G5 558 aaKnown RBP13.65□□□□□ -0.22
GARNL3-220ENST00000496711 NAALADL1Q9UQQ1 740 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 PIN4Q9Y237 131 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms