RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SH3GL2Q99962 352 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 TRAIPQ9BWF2 469 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 APOL6Q9BWW8 343 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 MAK16Q9BXY0 300 aaKnown RBP7.28□□□□□ -1.24
USP39-219ENST00000496047 DCLK3Q9C098 648 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 ERVK-5Q9HDB9 667 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 CHST12Q9NRB3 414 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 CHORDC1Q9UHD1 332 aaPredicted RBP7.28□□□□□ -1.24
USP39-219ENST00000496047 EFR3BQ9Y2G0 817 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 PTPN22Q9Y2R2 807 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 SNX9Q9Y5X1 595 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 NLRC5Q86WI3 1866 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 TANC1Q9C0D5 1861 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 A8MXQ7 604 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 O00370 1275 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 GPR182O15218 404 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 SEPT4O43236 478 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 TREHO43280 583 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 CSDE1O75534 798 aaKnown RBP7.27□□□□□ -1.25
USP39-219ENST00000496047 RPS6KA5O75582 802 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 CABYRO75952 493 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 SYF2O95926 243 aaKnown RBP7.27□□□□□ -1.25
USP39-219ENST00000496047 CALCAP01258 141 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 FAM163BP0C2L3 166 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 RARAP10276 462 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 KCNE1P15382 129 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 JUNDP17535 347 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 FGFR4P22455 802 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 HSD17B3P37058 310 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 SCNN1AP37088 669 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 ADCY8P40145 1251 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 GABRB2P47870 512 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 PLTPP55058 493 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 GJA9P57773 515 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 BST2Q10589 180 aaKnown RBP7.27□□□□□ -1.25
USP39-219ENST00000496047 NFX1Q12986 1120 aaKnown RBP7.27□□□□□ -1.25
USP39-219ENST00000496047 CRHR2Q13324 411 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 TFDP2Q14188 446 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 ARHGEF6Q15052 776 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 CCL14Q16627 93 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 PTPRNQ16849 979 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 KRT71Q3SY84 523 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 PKDCCQ504Y2 493 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 GNASQ5JWF2 1037 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 PRAMEF19Q5SWL8 479 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 CYP4A22Q5TCH4 519 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 KAZNQ674X7 775 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 SPOCD1Q6ZMY3 1216 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 RNF19BQ6ZMZ0 732 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 TRMT10CQ7L0Y3 403 aaKnown RBP7.27□□□□□ -1.25
USP39-219ENST00000496047 TAOK1Q7L7X3 1001 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 PHLDB2Q86SQ0 1253 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 TSEN2Q8NCE0 465 aaKnown RBP7.27□□□□□ -1.25
USP39-219ENST00000496047 ARMC2Q8NEN0 867 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 KAT2BQ92831 832 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 HAUS1Q96CS2 278 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 ATP6V1G3Q96LB4 118 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 SLITRK1Q96PX8 696 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 FERMT1Q9BQL6 677 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 CCDC77Q9BR77 488 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 UPF3AQ9H1J1 476 aaKnown RBP7.27□□□□□ -1.25
USP39-219ENST00000496047 CENPHQ9H3R5 247 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 CALCOCO1Q9P1Z2 691 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 TSPAN16Q9UKR8 245 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 NOD1Q9Y239 953 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 ATP8A1Q9Y2Q0 1164 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 SNX24Q9Y343 169 aa7.27□□□□□ -1.25
USP39-219ENST00000496047 MYO18AQ92614 2054 aaKnown RBP7.27□□□□□ -1.25
USP39-219ENST00000496047 KPNA7A9QM74 516 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 MCF2LO15068 1137 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 PRPSAP2O60256 369 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 PPFIA2O75334 1257 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 ADH1BP00325 375 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 FAM153BP0C7A2 387 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 CYBAP13498 195 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 RARGP13631 454 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 NR1D1P20393 614 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 SDC4P31431 198 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 PCK1P35558 622 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 PTGIRP43119 386 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 PSMC4P43686 418 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 TM4SF4P48230 202 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 CDH8P55286 799 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 ADAM17P78536 824 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 BEX3Q00994 111 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 NOGQ13253 232 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 SNX1Q13596 522 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 BYSLQ13895 437 aaKnown RBP7.26□□□□□ -1.25
USP39-219ENST00000496047 KRT81Q14533 505 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 PDK2Q15119 407 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 FAM153CQ494X1 144 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 C2CD6Q53TS8 623 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 C9orf57Q5W0N0 161 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 ARHGAP17Q68EM7 881 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 AADACL2Q6P093 401 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 DRICH1Q6PGQ1 229 aaPredicted RBP7.26□□□□□ -1.25
USP39-219ENST00000496047 CCDC25Q86WR0 208 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 VSIG1Q86XK7 387 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 DDX42Q86XP3 938 aaKnown RBP eCLIP7.26□□□□□ -1.25
USP39-219ENST00000496047 XYLT1Q86Y38 959 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms