RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 SAFBQ15424 915 aaKnown RBP eCLIP14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 ECM1Q16610 540 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 SYCP2LQ5T4T6 812 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 FILIP1Q7Z7B0 1213 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 DAW1Q8N136 415 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 KMT5AQ9NQR1 393 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 ARHGEF4Q9NR80 690 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 PCDHB5Q9Y5E4 795 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 A0A0A0MRY4 1105 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 BTBD18B2RXH4 712 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 SLC16A4O15374 487 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 NDUFS2O75306 463 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 NOL4O94818 638 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 ZNF883P0CG24 379 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 TCF3P15923 654 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 HDCP19113 662 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 GRIA2P42262 883 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 TNFRSF4P43489 277 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 BNC1Q01954 994 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 PPP2R3AQ06190 1150 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 SMARCB1Q12824 385 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 MYO1EQ12965 1108 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 KCNB1Q14721 858 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 CPLX2Q6PUV4 134 aaKnown RBP14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 DHRS13Q6UX07 377 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 ADGRG2Q8IZP9 1017 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 THEM5Q8N1Q8 247 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 TRMT2BQ96GJ1 504 aaKnown RBP14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 UXTQ9UBK9 157 aaPredicted RBP14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 ARHGAP26Q9UNA1 814 aa14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.75□□□□□ -0.05
EXOSC3-207ENST00000490516 CABIN1Q9Y6J0 2220 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 A0A1B0GTW7 788 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 E9PAM4 449 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 LEFTY2O00292 366 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 CYB561D2O14569 222 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 FLRT2O43155 660 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 RRP8O43159 456 aaKnown RBP14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 XPOTO43592 962 aaKnown RBP14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 HIP1RO75146 1068 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 ZNF217O75362 1048 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 CLTAP09496 248 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 HOXB2P14652 356 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 XBP1P17861 261 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 NDUFV2P19404 249 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 EIF2DP41214 584 aaKnown RBP14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 MATKP42679 507 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 MATR3P43243 847 aaKnown RBP eCLIP14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 ATP2C1P98194 919 aaPredicted RBP14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 MCL1Q07820 350 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 HLA-BQ31612 363 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 TAF1BQ53T94 588 aaPredicted RBP14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 WDR45BQ5MNZ6 344 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 SPATA1Q5VX52 437 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 C9orf57Q5W0N0 161 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 WSCD1Q658N2 575 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 RHBDF2Q6PJF5 856 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 DBX2Q6ZNG2 339 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 METTL23Q86XA0 190 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 DCP1BQ8IZD4 617 aaKnown RBP14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 PHTF2Q8N3S3 785 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 ZCCHC9Q8N567 271 aaKnown RBP14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 ZNF513Q8N8E2 541 aaPredicted RBP14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 NXPE2Q96DL1 559 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 MYRFLQ96LU7 910 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 ARID3AQ99856 593 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 PYM1Q9BRP8 204 aaKnown RBP14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 SEMA4CQ9C0C4 833 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 SLC6A17Q9H1V8 727 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 DSEQ9UL01 958 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 HCN2Q9UL51 889 aa14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 RBM19Q9Y4C8 960 aaKnown RBP14.74□□□□□ -0.05
EXOSC3-207ENST00000490516 COL12A1Q99715 3063 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 A0A1W2PQF6 199 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 PIRO00625 290 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 CLDN3O15551 220 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 WISP1O95388 367 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 CER1O95813 267 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 CYP2F1P24903 491 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 KRT2P35908 639 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 CLDN6P56747 220 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 CXADRP78310 365 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 MIB1Q86YT6 1006 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 FMNL3Q8IVF7 1028 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 ZNF274Q96GC6 653 aaPredicted RBP14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 DRC1Q96MC2 740 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 MIR1-1HGQ9H1L0 117 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 KNL1Q8NG31 2342 aa14.73□□□□□ -0.05
EXOSC3-207ENST00000490516 TBC1D3BA6NDS4 549 aa14.72□□□□□ -0.05
EXOSC3-207ENST00000490516 SFI1A8K8P3 1242 aa14.72□□□□□ -0.05
EXOSC3-207ENST00000490516 MEI4A8MW99 385 aa14.72□□□□□ -0.05
EXOSC3-207ENST00000490516 ERVH48-1M5A8F1 160 aa14.72□□□□□ -0.05
EXOSC3-207ENST00000490516 TNFSF14O43557 240 aa14.72□□□□□ -0.05
EXOSC3-207ENST00000490516 STRN3Q13033 797 aa14.72□□□□□ -0.05
EXOSC3-207ENST00000490516 MAPK7Q13164 816 aa14.72□□□□□ -0.05
EXOSC3-207ENST00000490516 ENOX2Q16206 610 aaKnown RBP14.72□□□□□ -0.05
EXOSC3-207ENST00000490516 PTPRNQ16849 979 aa14.72□□□□□ -0.05
EXOSC3-207ENST00000490516 JADE1Q6IE81 842 aa14.72□□□□□ -0.05
EXOSC3-207ENST00000490516 ERMNQ8TAM6 284 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms