RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 CBWD2Q8IUF1 395 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 CEP295NLQ96MC4 621 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 CATSPER2Q96P56 530 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 TUBGCP5Q96RT8 1024 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 KIAA1586Q9HCI6 787 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 HAO1Q9UJM8 370 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 CPSF3Q9UKF6 684 aaKnown RBP10.3□□□□□ -0.76
NOD1-208ENST00000489614 CROTQ9UKG9 612 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 PTPRJQ12913 1337 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 PTPRSQ13332 1948 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 CCDC169A6NNP5 214 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 OR6B1O95007 311 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 TROVE2P10155 538 aaKnown RBP eCLIP10.3□□□□□ -0.76
NOD1-208ENST00000489614 VAV1P15498 845 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 EPHB2P29323 1055 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 HALP42357 657 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 VAMP7P51809 220 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 TMEM214Q6NUQ4 689 aaKnown RBP10.3□□□□□ -0.76
NOD1-208ENST00000489614 ATXN2LQ8WWM7 1075 aaKnown RBP10.3□□□□□ -0.76
NOD1-208ENST00000489614 TLR10Q9BXR5 811 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 MYH10P35580 1976 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 COL4A6Q14031 1691 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 FTCDO95954 541 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 C4BPAP04003 597 aaKnown RBP10.3□□□□□ -0.76
NOD1-208ENST00000489614 HMGCRP04035 888 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 LYNP07948 512 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 VHLP40337 213 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 PCBP1Q15365 356 aaKnown RBP eCLIP10.3□□□□□ -0.76
NOD1-208ENST00000489614 TRIM71Q2Q1W2 868 aaKnown RBP10.3□□□□□ -0.76
NOD1-208ENST00000489614 SLFN12LQ6IEE8 588 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 GATA6Q92908 595 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 HAPLN3Q96S86 360 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 CENPKQ9BS16 269 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 KATNAL1Q9BW62 490 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 TMEM117Q9H0C3 514 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 CIDEBQ9UHD4 219 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 SALL4Q9UJQ4 1053 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 SLC9A1P19634 815 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 PRKCIP41743 596 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 CYP2J2P51589 502 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 NLRP11P59045 1033 aaKnown RBP10.29□□□□□ -0.76
NOD1-208ENST00000489614 KHDC1Q4VXA5 237 aaKnown RBP10.29□□□□□ -0.76
NOD1-208ENST00000489614 ZBTB41Q5SVQ8 909 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 TREML1Q86YW5 311 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 UBR7Q8N806 425 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 ZBTB45Q96K62 511 aaPredicted RBP10.29□□□□□ -0.76
NOD1-208ENST00000489614 ZMAT2Q96NC0 199 aaKnown RBP10.29□□□□□ -0.76
NOD1-208ENST00000489614 PDZD7Q9H5P4 517 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 DENND2DQ9H6A0 471 aaPredicted RBP10.29□□□□□ -0.76
NOD1-208ENST00000489614 CTNNAL1Q9UBT7 734 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 GTF2IRD1Q9UHL9 959 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 DOLKQ9UPQ8 538 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 FRMD4BQ9Y2L6 1034 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 SLC4A7Q9Y6M7 1214 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 E7ENQ6 273 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 TSPAN1O60635 241 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 OPHN1O60890 802 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 TOM1L1O75674 476 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 PRKCBP05771 671 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 CD97P48960 835 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 BEX3Q00994 111 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 TFDP1Q14186 410 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 IRF2BP2Q7Z5L9 587 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 TTC30AQ86WT1 665 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 BRSK2Q8IWQ3 736 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 NRG4Q8WWG1 115 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 ERLEC1Q96DZ1 483 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 TARS2Q9BW92 718 aaKnown RBP10.29□□□□□ -0.76
NOD1-208ENST00000489614 MRPL4Q9BYD3 311 aaKnown RBP10.29□□□□□ -0.76
NOD1-208ENST00000489614 STOML1Q9UBI4 398 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 BRCA2P51587 3418 aa10.29□□□□□ -0.76
NOD1-208ENST00000489614 K7ERI5 159 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 DAPK3O43293 454 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 WFS1O76024 890 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 RFX1P22670 979 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 NEK3P51956 506 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 ZNF572Q7Z3I7 529 aaPredicted RBP10.28□□□□□ -0.76
NOD1-208ENST00000489614 SLC7A5P1Q8MH63 180 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 RNF149Q8NC42 400 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 ZNF296Q8WUU4 475 aaPredicted RBP10.28□□□□□ -0.76
NOD1-208ENST00000489614 NAT14Q8WUY8 206 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 MTG1Q9BT17 334 aaPredicted RBP10.28□□□□□ -0.76
NOD1-208ENST00000489614 AP1M1Q9BXS5 423 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 DPH5Q9H2P9 285 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 PCIF1Q9H4Z3 704 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 TMEM8AQ9HCN3 771 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 SETD4Q9NVD3 440 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 PRMT7Q9NVM4 692 aaPredicted RBP10.28□□□□□ -0.76
NOD1-208ENST00000489614 PCDHA13Q9Y5I0 950 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 PTPRDP23468 1912 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 NLRC5Q86WI3 1866 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 LRRIQ4A6NIV6 560 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 VNN1O95497 513 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 ASMTLO95671 621 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 HOXA11P31270 313 aaPredicted RBP10.28□□□□□ -0.76
NOD1-208ENST00000489614 RXRGP48443 463 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 CDC42EP1Q00587 391 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 FAM26DQ5JW98 314 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 KLC3Q6P597 504 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 TRAF7Q6Q0C0 670 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms