RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 MRPL46Q9H2W6 279 aaKnown RBP3.59□□□□□ -1.83
CCDC93-209ENST00000488908 HEY2Q9UBP5 337 aa3.59□□□□□ -1.83
CCDC93-209ENST00000488908 FEZ2Q9UHY8 353 aaPredicted RBP3.59□□□□□ -1.83
CCDC93-209ENST00000488908 PCDHA3Q9Y5H8 950 aa3.59□□□□□ -1.83
CCDC93-209ENST00000488908 LRRC14BA6NHZ5 514 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 TLR2O60603 784 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 TULP3O75386 442 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 MYCLP12524 364 aaPredicted RBP3.58□□□□□ -1.84
CCDC93-209ENST00000488908 FPR3P25089 353 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 IARSP41252 1262 aaKnown RBP3.58□□□□□ -1.84
CCDC93-209ENST00000488908 RHDQ02161 417 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 INAVAQ3KP66 663 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 C4orf46Q504U0 113 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 RNASE12Q5GAN4 147 aaKnown RBP3.58□□□□□ -1.84
CCDC93-209ENST00000488908 ANO7Q6IWH7 933 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 COLCA1Q6ZS62 124 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 BCDIN3DQ7Z5W3 292 aaKnown RBP3.58□□□□□ -1.84
CCDC93-209ENST00000488908 ANKRD13BQ86YJ7 626 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 ARFGAP1Q8N6T3 406 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 CNTD1Q8N815 330 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 FAXDC2Q96IV6 333 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 MOGAT1Q96PD6 335 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 MMS19Q96T76 1030 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 PUS7LQ9H0K6 701 aaKnown RBP3.58□□□□□ -1.84
CCDC93-209ENST00000488908 TMEM184CQ9NVA4 438 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 NDRG4Q9ULP0 352 aaKnown RBP3.58□□□□□ -1.84
CCDC93-209ENST00000488908 MRFAP1Q9Y605 127 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 HS3ST3B1Q9Y662 390 aa3.58□□□□□ -1.84
CCDC93-209ENST00000488908 SLC16A6O15403 523 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 KRT10P13645 584 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 PDE6CP51160 858 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 SATB1Q01826 763 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 AMOTQ4VCS5 1084 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 THEMIS2Q5TEJ8 643 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 ZNF549Q6P9A3 640 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 PHLDB1Q86UU1 1377 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 ZNF548Q8NEK5 533 aaPredicted RBP3.57□□□□□ -1.84
CCDC93-209ENST00000488908 OSCP1Q8WVF1 389 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 MAP4K1Q92918 833 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 TEKT5Q96M29 485 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 SLCO5A1Q9H2Y9 848 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 ASIC5Q9NY37 505 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 MDFICQ9P1T7 246 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 ABCF2Q9UG63 623 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 SERPINB13Q9UIV8 391 aa3.57□□□□□ -1.84
CCDC93-209ENST00000488908 AP4M1O00189 453 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 PCDHGA12O60330 932 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 CNOT3O75175 753 aaKnown RBP3.56□□□□□ -1.84
CCDC93-209ENST00000488908 MT-CO1P00395 513 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 PHKG2P15735 406 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 E2F1Q01094 437 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 NOGQ13253 232 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 DEPDC1Q5TB30 811 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 KRT26Q7Z3Y9 468 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 HEATR3Q7Z4Q2 680 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 SFTPA1Q8IWL2 248 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.56□□□□□ -1.84
CCDC93-209ENST00000488908 DCP1BQ8IZD4 617 aaKnown RBP3.56□□□□□ -1.84
CCDC93-209ENST00000488908 CBARPQ8N350 705 aaPredicted RBP3.56□□□□□ -1.84
CCDC93-209ENST00000488908 SIRT6Q8N6T7 355 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 PNISRQ8TF01 805 aaKnown RBP3.56□□□□□ -1.84
CCDC93-209ENST00000488908 AMFRQ9UKV5 643 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 SHOC2Q9UQ13 582 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 TBX22Q9Y458 520 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 PCDHGA9Q9Y5G4 932 aaKnown RBP3.56□□□□□ -1.84
CCDC93-209ENST00000488908 PCDHGA8Q9Y5G5 932 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 PCDHGA7Q9Y5G6 932 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 PCDHGA6Q9Y5G7 932 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 PCDHGA3Q9Y5H0 932 aa3.56□□□□□ -1.84
CCDC93-209ENST00000488908 LACTBL1A8MY62 500 aa3.55□□□□□ -1.84
CCDC93-209ENST00000488908 AHSGP02765 367 aa3.55□□□□□ -1.84
CCDC93-209ENST00000488908 VIL1P09327 827 aaKnown RBP3.55□□□□□ -1.84
CCDC93-209ENST00000488908 LRPAP1P30533 357 aa3.55□□□□□ -1.84
CCDC93-209ENST00000488908 THBS4P35443 961 aa3.55□□□□□ -1.84
CCDC93-209ENST00000488908 VIPR2P41587 438 aa3.55□□□□□ -1.84
CCDC93-209ENST00000488908 ADKP55263 362 aaKnown RBP3.55□□□□□ -1.84
CCDC93-209ENST00000488908 RPS13P62277 151 aaKnown RBP3.55□□□□□ -1.84
CCDC93-209ENST00000488908 KRT85P78386 507 aa3.55□□□□□ -1.84
CCDC93-209ENST00000488908 CYP1B1Q16678 543 aa3.55□□□□□ -1.84
CCDC93-209ENST00000488908 ZNF585BQ52M93 769 aa3.55□□□□□ -1.84
CCDC93-209ENST00000488908 CAND1Q86VP6 1230 aaKnown RBP3.55□□□□□ -1.84
CCDC93-209ENST00000488908 PCSK9Q8NBP7 692 aaKnown RBP3.55□□□□□ -1.84
CCDC93-209ENST00000488908 MPLKIPQ8TAP9 179 aa3.55□□□□□ -1.84
CCDC93-209ENST00000488908 ZFYVE19Q96K21 471 aa3.55□□□□□ -1.84
CCDC93-209ENST00000488908 TRMT13Q9NUP7 481 aaKnown RBP3.55□□□□□ -1.84
CCDC93-209ENST00000488908 SLC5A4Q9NY91 659 aa3.55□□□□□ -1.84
CCDC93-209ENST00000488908 C4orf47A7E2U8 309 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 MT-CO3P00414 261 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 FGAP02671 866 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 MYBL2P10244 700 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 CTSAP10619 480 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 HK3P52790 923 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 CFHR1Q03591 330 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 EXOSC9Q06265 439 aaKnown RBP3.54□□□□□ -1.84
CCDC93-209ENST00000488908 TMEM63BQ5T3F8 832 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 NOP9Q86U38 636 aaKnown RBP3.54□□□□□ -1.84
CCDC93-209ENST00000488908 PPP1R3BQ86XI6 285 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 LIX1LQ8IVB5 337 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 IZUMO1Q8IYV9 350 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms