RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 RFX6Q8HWS3 928 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 NAT8LQ8N9F0 302 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 RXFP2Q8WXD0 754 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 KIF12Q96FN5 646 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 ZMAT2Q96NC0 199 aaKnown RBP11.03□□□□□ -0.64
MINDY3-206ENST00000477891 ABCF3Q9NUQ8 709 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
MINDY3-206ENST00000477891 TSPAN16Q9UKR8 245 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 SHOC2Q9UQ13 582 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 NME7Q9Y5B8 376 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 LOC102724159A0A0B4J2E5 919 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 A0A1W2PPM1 405 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 PDHXO00330 501 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 PDGFRAP16234 1089 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 SMPD1P17405 629 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 HOXA11P31270 313 aaPredicted RBP11.03□□□□□ -0.64
MINDY3-206ENST00000477891 ZNF143P52747 638 aaPredicted RBP11.03□□□□□ -0.64
MINDY3-206ENST00000477891 RBP5P82980 135 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 PWP2Q15269 919 aaKnown RBP11.03□□□□□ -0.64
MINDY3-206ENST00000477891 ZKSCAN8Q15776 578 aaPredicted RBP11.03□□□□□ -0.64
MINDY3-206ENST00000477891 HIF1AQ16665 826 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 CDO1Q16878 200 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 PMF1Q6P1K2 205 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 USP50Q70EL3 339 aaPredicted RBP11.03□□□□□ -0.64
MINDY3-206ENST00000477891 CENPUQ71F23 418 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 TRPM8Q7Z2W7 1104 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 TGS1Q96RS0 853 aaKnown RBP11.03□□□□□ -0.64
MINDY3-206ENST00000477891 LPIN3Q9BQK8 851 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 ACTR5Q9H9F9 607 aaPredicted RBP11.03□□□□□ -0.64
MINDY3-206ENST00000477891 CDHR5Q9HBB8 845 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 SLC40A1Q9NP59 571 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 HES2Q9Y543 173 aa11.03□□□□□ -0.64
MINDY3-206ENST00000477891 SCN1AP35498 2009 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 TRIP11Q15643 1979 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 RBM47A0AV96 593 aaKnown RBP11.02□□□□□ -0.64
MINDY3-206ENST00000477891 C2CD4BA6NLJ0 364 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 APOC4-APOC2K7ER74 178 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 ADCY6O43306 1168 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 GABBR2O75899 941 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 TMEM63AO94886 807 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 ENDOD1O94919 500 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 APOC2P02655 101 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 RBP3P10745 1247 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 STX2P32856 288 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 EIF3EP60228 445 aaKnown RBP11.02□□□□□ -0.64
MINDY3-206ENST00000477891 EFTUD2Q15029 972 aaKnown RBP eCLIP11.02□□□□□ -0.647e-6■■■■■ 30.5
MINDY3-206ENST00000477891 GRIK4Q16099 956 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 SYCP2LQ5T4T6 812 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 PPP1R26Q5T8A7 1209 aaPredicted RBP11.02□□□□□ -0.64
MINDY3-206ENST00000477891 OR6B2Q6IFH4 312 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 CGB2Q6NT52 195 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 LCLAT1Q6UWP7 414 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 ARHGEF18Q6ZSZ5 1173 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 FAM183BPQ6ZVS7 135 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 ZC3H18Q86VM9 953 aaKnown RBP11.02□□□□□ -0.64
MINDY3-206ENST00000477891 PPIL6Q8IXY8 311 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 TTC13Q8NBP0 860 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 SPATA18Q8TC71 538 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 ZC3H15Q8WU90 426 aaKnown RBP11.02□□□□□ -0.64
MINDY3-206ENST00000477891 RSAD2Q8WXG1 361 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 EMID1Q96A84 441 aaPredicted RBP11.02□□□□□ -0.64
MINDY3-206ENST00000477891 MS4A4AQ96JQ5 239 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 TTC25Q96NG3 672 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 MRPL45Q9BRJ2 306 aaKnown RBP11.02□□□□□ -0.64
MINDY3-206ENST00000477891 NT5C1AQ9BXI3 368 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 VTA1Q9NP79 307 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 SETD4Q9NVD3 440 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 HAUS2Q9NVX0 235 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 ITGA11Q9UKX5 1188 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 C2CD2Q9Y426 696 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 ACTL7BQ9Y614 415 aa11.02□□□□□ -0.64
MINDY3-206ENST00000477891 BTBD19C9JJ37 291 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 HCRTO43612 131 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 GHRP10912 638 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 P4HA1P13674 534 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 TAC1P20366 129 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 IL4RP24394 825 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 CDH6P55285 790 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 ATP11AP98196 1134 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 CCDC14Q49A88 953 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 FAM133BQ5BKY9 247 aaKnown RBP11.02□□□□□ -0.65
MINDY3-206ENST00000477891 CEP128Q6ZU80 1094 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 C3orf62Q6ZUJ4 267 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 ACOT1Q86TX2 421 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 TDRPQ86YL5 185 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 SCUBE3Q8IX30 993 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 C4orf33Q8N1A6 199 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 DENND1AQ8TEH3 1009 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 KHSRPQ92945 711 aaKnown RBP eCLIP11.02□□□□□ -0.657e-8■■■■□ 19.7
MINDY3-206ENST00000477891 PAIP2Q9BPZ3 127 aaKnown RBP11.02□□□□□ -0.65
MINDY3-206ENST00000477891 ZNF408Q9H9D4 720 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 UBN1Q9NPG3 1134 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.02□□□□□ -0.65
MINDY3-206ENST00000477891 ASNSD1Q9NWL6 643 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 SNTG2Q9NY99 539 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 NKIRAS1Q9NYS0 192 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.02□□□□□ -0.65
MINDY3-206ENST00000477891 RABGEF1Q9UJ41 708 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 GRID1Q9ULK0 1009 aa11.02□□□□□ -0.65
MINDY3-206ENST00000477891 USP15Q9Y4E8 981 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms