RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 LEFTY2O00292 366 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 CDX4O14627 284 aaPredicted RBP7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 ATP2C2O75185 946 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 GCNT3O95395 438 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 APODP05090 189 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 CYP17A1P05093 508 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 PRR29P0C7W0 189 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 ENGP17813 658 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 CSRP1P21291 193 aaKnown RBP7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 PCSK1P29120 753 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 RDXP35241 583 aaKnown RBP7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 OPRD1P41143 372 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 PTGER3P43115 390 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 ZNF131P52739 623 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 GTF2BQ00403 316 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 MYO1EQ12965 1108 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 RESTQ13127 1097 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 POSTNQ15063 836 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 CRY1Q16526 586 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 LYSMD4Q5XG99 296 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 ARL6IP4Q66PJ3 421 aaKnown RBP7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 TMEM92Q6UXU6 159 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 HS2ST1Q7LGA3 356 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 OSTM1Q86WC4 334 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 NT5DC4Q86YG4 428 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 TMEM86AQ8N2M4 240 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 FRMD1Q8N878 549 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 C1orf127Q8N9H9 656 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 KDF1Q8NAX2 398 aaPredicted RBP7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 SPATA18Q8TC71 538 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 LEO1Q8WVC0 666 aaPredicted RBP7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 MYLPFQ96A32 169 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 AK8Q96MA6 479 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 PNKPQ96T60 521 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 MMS19Q96T76 1030 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 SYT15Q9BQS2 421 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 ACBD6Q9BR61 282 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 MTMR12Q9C0I1 747 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 CCSER1Q9C0I3 900 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 PCIF1Q9H4Z3 704 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 ABCB6Q9NP58 842 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 BLOC1S4Q9NUP1 217 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 TRPM5Q9NZQ8 1165 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 KLK13Q9UKR3 277 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 EXOC7Q9UPT5 735 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 TP53BP1Q12888 1972 aaPredicted RBP7.15□□□□□ -1.27
RTFDC1-206ENST00000477485 GON4LQ3T8J9 2241 aa7.15□□□□□ -1.27
RTFDC1-206ENST00000477485 SGK1O00141 431 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 ZBTB24O43167 697 aaPredicted RBP7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 KAT7O95251 611 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 ADH1CP00326 375 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 LDHAP00338 332 aaKnown RBP7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 PDGFRBP09619 1106 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 MBL2P11226 248 aaPredicted RBP7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 ADH5P11766 374 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 IDEP14735 1019 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 BDNFP23560 247 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 ITPKAP23677 461 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 GJB2P29033 226 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 WASP42768 502 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 SLC6A11P48066 632 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 LHX1P48742 406 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 WNT7BP56706 349 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 MRPS21P82921 87 aaKnown RBP7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 RBP5P82980 135 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 RPL6Q02878 288 aaKnown RBP7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 GRIN1Q05586 938 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 GFPT1Q06210 699 aaPredicted RBP7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 RING1Q06587 406 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 BYSLQ13895 437 aaKnown RBP7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 MDH1BQ5I0G3 518 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 EOGTQ5NDL2 527 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 EMC10Q5UCC4 262 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 CRELD2Q6UXH1 353 aaPredicted RBP7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 DENND5BQ6ZUT9 1274 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 RASSF3Q86WH2 238 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 SYT12Q8IV01 421 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 SFTPA1Q8IWL2 248 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 BRSK2Q8IWQ3 736 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 NAT16Q8N8M0 369 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 ZSWIM2Q8NEG5 633 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 LRRC15Q8TF66 581 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 GATA6Q92908 595 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 ANKRD36BP1Q96IX9 119 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 MYRFLQ96LU7 910 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 ACCSQ96QU6 501 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 ARHGEF4Q9NR80 690 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 TMEM74BQ9NUR3 256 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 GCNT4Q9P109 453 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 CFAP97Q9P2B7 532 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 ITGA11Q9UKX5 1188 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 ARHGAP26Q9UNA1 814 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 PCDHB9Q9Y5E1 797 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 CPQQ9Y646 472 aa7.14□□□□□ -1.27
RTFDC1-206ENST00000477485 PCNX2A6NKB5 2137 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 PTPRBP23467 1997 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 PCDH15Q96QU1 1955 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 TMEM131Q92545 1883 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 TBC1D3BA6NDS4 549 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 SLC9A3R1O14745 358 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms