RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 ADAM2Q99965 735 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 FBRSQ9HAH7 460 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 SYTL2Q9HCH5 934 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 PDGFCQ9NRA1 345 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 RIC8BQ9NVN3 520 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 ABI3Q9P2A4 366 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 DNMT3LQ9UJW3 386 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 GMEB2Q9UKD1 530 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 BRPF3Q9ULD4 1205 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 APOBEC2Q9Y235 224 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 AP3M1Q9Y2T2 418 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 DYRK1BQ9Y463 629 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 A0A087WUV0 522 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CYP3A7-CYP3A51PA0A087WV96 503 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 A0A1B0GUA9 196 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 MEI4A8MW99 385 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ARVCFO00192 962 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 PIK3R2O00459 728 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ATP4AP20648 1035 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CYP3A7P24462 503 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 GRM5P41594 1212 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 THOP1P52888 689 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 PRKAA2P54646 552 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 PLOD1Q02809 727 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CEP85LQ5SZL2 805 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ALS2CLQ60I27 953 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 PTRHD1Q6GMV3 140 aaKnown RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 RIBC1Q8N443 379 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 MAB21L3Q8N8X9 362 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 MSANTD3Q96H12 275 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 RPRD1AQ96P16 312 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 REEP2Q9BRK0 252 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 COPS7BQ9H9Q2 264 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 NEK6Q9HC98 313 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ERVW-1Q9UQF0 538 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 PPP2R2CQ9Y2T4 447 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 PLIN4Q96Q06 1357 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 LRRC72A6NJI9 287 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 H3BQF6 201 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ZNF263O14978 683 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 SOAT2O75908 522 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 PTPN2P17706 415 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CNTFP26441 200 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 SERPINA4P29622 427 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 NPTX2P47972 431 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CLK3P49761 638 aaKnown RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 BLKP51451 505 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 TBX4P57082 545 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 DR1Q01658 176 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 SLC20A2Q08357 652 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ELP6Q0PNE2 266 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 NAB1Q13506 487 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ZNF268Q14587 947 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 PSMD5Q16401 504 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 PPP2R2DQ66LE6 453 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 PID1Q7Z2X4 250 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 PRPF39Q86UA1 669 aaKnown RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 LMNTD2Q8IXW0 634 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 C7orf61Q8IZ16 206 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 LRRC46Q96FV0 321 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 NELL2Q99435 816 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 C11orf70Q9BRQ4 267 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 LMBRD1Q9NUN5 540 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 THEGQ9P2T0 379 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 LIMA1Q9UHB6 759 aaKnown RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CDC23Q9UJX2 597 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 SLC39A10Q9ULF5 831 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CHMP2BQ9UQN3 213 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ZFP37Q9Y6Q3 630 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ERI2A8K979 691 aaKnown RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 SYCE1LA8MT33 242 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 DFFAO00273 331 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 BUB1O43683 1085 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ERN1O75460 977 aaKnown RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 DNAJC8O75937 253 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 SNUPNO95149 360 aaKnown RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 GHRP10912 638 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ADCYAP1R1P41586 468 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 RXRGP48443 463 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 NR2C2P49116 596 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 DUSP3P51452 185 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CASP7P55210 303 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 RHOAP61586 193 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 HPCAP84074 193 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 PDAP1Q13442 181 aaKnown RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 NXNQ6DKJ4 435 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 USP45Q70EL2 814 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 MYLK4Q86YV6 388 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 MYCBPAPQ8TBZ2 947 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CXorf40AQ8TE69 158 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 DNAJB3Q8WWF6 145 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 OR8D1Q8WZ84 308 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 IRGQQ8WZA9 623 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 TADA1Q96BN2 335 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CYFIP2Q96F07 1278 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 TTPALQ9BTX7 342 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 PORCNQ9H237 461 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 RPRD1BQ9NQG5 326 aaKnown RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ATRNL1Q5VV63 1379 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CHD2O14647 1828 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms