RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 ITIH2P19823 946 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 PSMA2P25787 234 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 PMS2P54278 862 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 SLC25A11Q02978 314 aaKnown RBP17.77■□□□□ 0.44
YIPF3-205ENST00000460547 CAV1Q03135 178 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 CALCOCO2Q13137 446 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 SLMAPQ14BN4 828 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 SPOCD1Q6ZMY3 1216 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 ANKS1BQ7Z6G8 1248 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 UNC93AQ86WB7 457 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 JOSD2Q8TAC2 188 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 IPO4Q8TEX9 1081 aaKnown RBP17.77■□□□□ 0.44
YIPF3-205ENST00000460547 TMEM40Q8WWA1 233 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 SNF8Q96H20 258 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 SCLYQ96I15 445 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 HEMGNQ9BXL5 484 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 TRIM6Q9C030 488 aaPredicted RBP17.77■□□□□ 0.44
YIPF3-205ENST00000460547 EPB41L4BQ9H329 900 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 SYNCQ9H7C4 482 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 IL23AQ9NPF7 189 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 TJP2Q9UDY2 1190 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 TUBGCP4Q9UGJ1 667 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 PIN4Q9Y237 131 aaKnown RBP17.77■□□□□ 0.44
YIPF3-205ENST00000460547 ATP8A1Q9Y2Q0 1164 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 GOLGA8SH3BPF8 625 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 PITPNM1O00562 1244 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 XPOTO43592 962 aaKnown RBP17.77■□□□□ 0.43
YIPF3-205ENST00000460547 KRT7P08729 469 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 ACRP10323 421 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 ATF7P17544 494 aaPredicted RBP17.77■□□□□ 0.43
YIPF3-205ENST00000460547 CYP3A5P20815 502 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 IVDP26440 423 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 GJC1P36383 396 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 LMNB2Q03252 620 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 SNX1Q13596 522 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 UBXN11Q5T124 520 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 AGBL2Q5U5Z8 902 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 TAF2Q6P1X5 1199 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 PSRC1Q6PGN9 363 aaPredicted RBP17.77■□□□□ 0.43
YIPF3-205ENST00000460547 RHBDF2Q6PJF5 856 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 MFSD7Q6UXD7 560 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 KDM7AQ6ZMT4 941 aa17.77■□□□□ 0.43
YIPF3-205ENST00000460547 PDCD11Q14690 1871 aaKnown RBP17.76■□□□□ 0.43
YIPF3-205ENST00000460547 TRIOBPQ9H2D6 2365 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 RANBP2P49792 3224 aaKnown RBP17.76■□□□□ 0.43
YIPF3-205ENST00000460547 hCG_1818297A0A087WSY0 165 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 TP73O15350 636 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 LRCH4O75427 683 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 FGBP02675 491 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 ACTN2P35609 894 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 CDKN2BP42772 138 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 PTK7Q13308 1070 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 LLGL1Q15334 1064 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 TAZQ16635 292 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 HADHQ16836 314 aaKnown RBP17.76■□□□□ 0.43
YIPF3-205ENST00000460547 KCTD19Q17RG1 926 aaPredicted RBP17.76■□□□□ 0.43
YIPF3-205ENST00000460547 PKDCCQ504Y2 493 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 TFDP3Q5H9I0 405 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 C9orf57Q5W0N0 161 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 RNF25Q96BH1 459 aaPredicted RBP17.76■□□□□ 0.43
YIPF3-205ENST00000460547 TSPYL1Q9H0U9 437 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 CXCL16Q9H2A7 254 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 METTL5Q9NRN9 209 aaKnown RBP17.76■□□□□ 0.43
YIPF3-205ENST00000460547 ASIC3Q9UHC3 531 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 TSPAN16Q9UKR8 245 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 LTBP2Q14767 1821 aa17.76■□□□□ 0.43
YIPF3-205ENST00000460547 SOX1O00570 391 aaPredicted RBP17.75■□□□□ 0.43
YIPF3-205ENST00000460547 PPEF2O14830 753 aa17.75■□□□□ 0.43
YIPF3-205ENST00000460547 LIASO43766 372 aa17.75■□□□□ 0.43
YIPF3-205ENST00000460547 RARGP13631 454 aa17.75■□□□□ 0.43
YIPF3-205ENST00000460547 PNPLA4P41247 253 aa17.75■□□□□ 0.43
YIPF3-205ENST00000460547 ZNF200P98182 395 aaPredicted RBP17.75■□□□□ 0.43
YIPF3-205ENST00000460547 ATP13A4Q4VNC1 1196 aa17.75■□□□□ 0.43
YIPF3-205ENST00000460547 ZNF365Q70YC5 407 aa17.75■□□□□ 0.43
YIPF3-205ENST00000460547 C16orf59Q7L2K0 433 aa17.75■□□□□ 0.43
YIPF3-205ENST00000460547 CCDC89Q8N998 374 aa17.75■□□□□ 0.43
YIPF3-205ENST00000460547 BBOF1Q8ND07 529 aa17.75■□□□□ 0.43
YIPF3-205ENST00000460547 CCHCR1Q8TD31 782 aa17.75■□□□□ 0.43
YIPF3-205ENST00000460547 C18orf25Q96B23 403 aaPredicted RBP17.75■□□□□ 0.43
YIPF3-205ENST00000460547 LRCH3Q96II8 777 aa17.75■□□□□ 0.43
YIPF3-205ENST00000460547 ZNF560Q96MR9 790 aa17.75■□□□□ 0.43
YIPF3-205ENST00000460547 MRPL45Q9BRJ2 306 aaKnown RBP17.75■□□□□ 0.43
YIPF3-205ENST00000460547 HES2Q9Y543 173 aa17.75■□□□□ 0.43
YIPF3-205ENST00000460547 SNX9Q9Y5X1 595 aa17.75■□□□□ 0.43
YIPF3-205ENST00000460547 C3orf70A6NLC5 250 aaPredicted RBP17.74■□□□□ 0.43
YIPF3-205ENST00000460547 PI4K2BG5E9Z4 385 aa17.74■□□□□ 0.43
YIPF3-205ENST00000460547 PIRO00625 290 aa17.74■□□□□ 0.43
YIPF3-205ENST00000460547 PFKMP08237 780 aa17.74■□□□□ 0.43
YIPF3-205ENST00000460547 ATF2P15336 505 aa17.74■□□□□ 0.43
YIPF3-205ENST00000460547 PCK1P35558 622 aa17.74■□□□□ 0.43
YIPF3-205ENST00000460547 TMEM240Q5SV17 173 aa17.74■□□□□ 0.43
YIPF3-205ENST00000460547 ARHGAP17Q68EM7 881 aa17.74■□□□□ 0.43
YIPF3-205ENST00000460547 TXNRD3NBQ6F5E7 133 aa17.74■□□□□ 0.43
YIPF3-205ENST00000460547 LIMS2Q7Z4I7 341 aa17.74■□□□□ 0.43
YIPF3-205ENST00000460547 CROCCP2Q86T23 111 aa17.74■□□□□ 0.43
YIPF3-205ENST00000460547 SH2D3CQ8N5H7 860 aa17.74■□□□□ 0.43
YIPF3-205ENST00000460547 ARFGAP1Q8N6T3 406 aa17.74■□□□□ 0.43
YIPF3-205ENST00000460547 OR2W6PQ8NHA6 318 aa17.74■□□□□ 0.43
YIPF3-205ENST00000460547 STK32AQ8WU08 396 aa17.74■□□□□ 0.43
YIPF3-205ENST00000460547 RAPGEF5Q92565 580 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms