RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 MYO1EQ12965 1108 aa22.59■■□□□ 1.21
TRAF4-203ENST00000394925 CYP2U1Q7Z449 544 aa22.59■■□□□ 1.21
TRAF4-203ENST00000394925 KBTBD7Q8WVZ9 684 aa22.59■■□□□ 1.21
TRAF4-203ENST00000394925 HPDLQ96IR7 371 aa22.59■■□□□ 1.21
TRAF4-203ENST00000394925 SPATA17Q96L03 361 aa22.59■■□□□ 1.21
TRAF4-203ENST00000394925 CLIC6Q96NY7 704 aa22.59■■□□□ 1.21
TRAF4-203ENST00000394925 CRTAC1Q9NQ79 661 aa22.59■■□□□ 1.21
TRAF4-203ENST00000394925 TRPM5Q9NZQ8 1165 aa22.59■■□□□ 1.21
TRAF4-203ENST00000394925 FBXO2Q9UK22 296 aaPredicted RBP22.59■■□□□ 1.21
TRAF4-203ENST00000394925 CDH9Q9ULB4 789 aa22.59■■□□□ 1.21
TRAF4-203ENST00000394925 FAM208BQ5VWN6 2430 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 VPS37CA5D8V6 355 aaPredicted RBP22.58■■□□□ 1.21
TRAF4-203ENST00000394925 PATE3B3GLJ2 98 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 PRPF6O94906 941 aaKnown RBP22.58■■□□□ 1.21
TRAF4-203ENST00000394925 PDGFRBP09619 1106 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 TXLNAP40222 546 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 CYP27A1Q02318 531 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 ZNF252P-AS1Q0IIN9 211 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 FOXC1Q12948 553 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 ALCAMQ13740 583 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 GAB4Q2WGN9 574 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 SH3PXD2AQ5TCZ1 1133 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 VSTM1Q6UX27 236 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 DENND5BQ6ZUT9 1274 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 DPH6Q7L8W6 267 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 RASSF3Q86WH2 238 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 GPD1LQ8N335 351 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 OR5B17Q8NGF7 314 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 CNOT6LQ96LI5 555 aaKnown RBP22.58■■□□□ 1.21
TRAF4-203ENST00000394925 TMEM9BQ9NQ34 198 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 INTS13Q9NVM9 706 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 MMP17Q9ULZ9 603 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 SRPRBQ9Y5M8 271 aaKnown RBP22.58■■□□□ 1.21
TRAF4-203ENST00000394925 IGF2RP11717 2491 aa22.58■■□□□ 1.21
TRAF4-203ENST00000394925 GON4LQ3T8J9 2241 aa22.58■■□□□ 1.2
TRAF4-203ENST00000394925 PTPRJQ12913 1337 aa22.57■■□□□ 1.2
TRAF4-203ENST00000394925 C1QTNF9BB2RNN3 333 aa22.57■■□□□ 1.2
TRAF4-203ENST00000394925 C1QTNF9P0C862 333 aa22.57■■□□□ 1.2
TRAF4-203ENST00000394925 ANXA13P27216 316 aa22.57■■□□□ 1.2
TRAF4-203ENST00000394925 DHPSP49366 369 aaPredicted RBP22.57■■□□□ 1.2
TRAF4-203ENST00000394925 CRY1Q16526 586 aa22.57■■□□□ 1.2
TRAF4-203ENST00000394925 LIMS2Q7Z4I7 341 aa22.57■■□□□ 1.2
TRAF4-203ENST00000394925 FILIP1Q7Z7B0 1213 aa22.57■■□□□ 1.2
TRAF4-203ENST00000394925 MDGA1Q8NFP4 955 aa22.57■■□□□ 1.2
TRAF4-203ENST00000394925 PANK4Q9NVE7 773 aa22.57■■□□□ 1.2
TRAF4-203ENST00000394925 MYOFQ9NZM1 2061 aa22.57■■□□□ 1.2
TRAF4-203ENST00000394925 PTPRDP23468 1912 aa22.57■■□□□ 1.2
TRAF4-203ENST00000394925 ZZEF1O43149 2961 aa22.56■■□□□ 1.2
TRAF4-203ENST00000394925 SCAMP3O14828 347 aaKnown RBP22.56■■□□□ 1.2
TRAF4-203ENST00000394925 ABL1P00519 1130 aa22.56■■□□□ 1.2
TRAF4-203ENST00000394925 TNNC2P02585 160 aa22.56■■□□□ 1.2
TRAF4-203ENST00000394925 CYP17A1P05093 508 aa22.56■■□□□ 1.2
TRAF4-203ENST00000394925 PFKLP17858 780 aa22.56■■□□□ 1.2
TRAF4-203ENST00000394925 MAPRE1Q15691 268 aaKnown RBP22.56■■□□□ 1.2
TRAF4-203ENST00000394925 TMEM92Q6UXU6 159 aa22.56■■□□□ 1.2
TRAF4-203ENST00000394925 PIGKQ92643 395 aa22.56■■□□□ 1.2
TRAF4-203ENST00000394925 MMS19Q96T76 1030 aa22.56■■□□□ 1.2
TRAF4-203ENST00000394925 PANK2Q9BZ23 570 aa22.56■■□□□ 1.2
TRAF4-203ENST00000394925 RNF38Q9H0F5 515 aa22.56■■□□□ 1.2
TRAF4-203ENST00000394925 CIZ1Q9ULV3 898 aaPredicted RBP22.56■■□□□ 1.2
TRAF4-203ENST00000394925 ASCC3Q8N3C0 2202 aaKnown RBP22.55■■□□□ 1.2
TRAF4-203ENST00000394925 FRMD3A2A2Y4 597 aa22.55■■□□□ 1.2
TRAF4-203ENST00000394925 CDX4O14627 284 aaPredicted RBP22.55■■□□□ 1.2
TRAF4-203ENST00000394925 HNRNPLP14866 589 aaKnown RBP eCLIP22.55■■□□□ 1.2
TRAF4-203ENST00000394925 SPINK2P20155 84 aa22.55■■□□□ 1.2
TRAF4-203ENST00000394925 SLC6A11P48066 632 aa22.55■■□□□ 1.2
TRAF4-203ENST00000394925 IRX4P78413 519 aa22.55■■□□□ 1.2
TRAF4-203ENST00000394925 MRPS21P82921 87 aaKnown RBP22.55■■□□□ 1.2
TRAF4-203ENST00000394925 DUOXA2Q1HG44 320 aa22.55■■□□□ 1.2
TRAF4-203ENST00000394925 UAP1L1Q3KQV9 507 aa22.55■■□□□ 1.2
TRAF4-203ENST00000394925 UNQ6494/PRO21346Q6UXR6 183 aa22.55■■□□□ 1.2
TRAF4-203ENST00000394925 CCDC73Q6ZRK6 1079 aa22.55■■□□□ 1.2
TRAF4-203ENST00000394925 SFTPA1Q8IWL2 248 aa22.55■■□□□ 1.2
TRAF4-203ENST00000394925 ADGRG2Q8IZP9 1017 aa22.55■■□□□ 1.2
TRAF4-203ENST00000394925 PCED1BQ96HM7 432 aa22.55■■□□□ 1.2
TRAF4-203ENST00000394925 CEP295NLQ96MC4 621 aa22.55■■□□□ 1.2
TRAF4-203ENST00000394925 SMPD4Q9NXE4 827 aa22.55■■□□□ 1.2
TRAF4-203ENST00000394925 CPQQ9Y646 472 aa22.55■■□□□ 1.2
TRAF4-203ENST00000394925 ZNF840PA6NDX5 716 aa22.54■■□□□ 1.2
TRAF4-203ENST00000394925 ZNF233A6NK53 670 aa22.54■■□□□ 1.2
TRAF4-203ENST00000394925 TRIM66O15016 1216 aa22.54■■□□□ 1.2
TRAF4-203ENST00000394925 ALDH1A2O94788 518 aa22.54■■□□□ 1.2
TRAF4-203ENST00000394925 WARSP23381 471 aaKnown RBP22.54■■□□□ 1.2
TRAF4-203ENST00000394925 STAT6P42226 847 aa22.54■■□□□ 1.2
TRAF4-203ENST00000394925 SLC7A9P82251 487 aa22.54■■□□□ 1.2
TRAF4-203ENST00000394925 CEBPZQ03701 1054 aaKnown RBP22.54■■□□□ 1.2
TRAF4-203ENST00000394925 MESP2Q0VG99 397 aa22.54■■□□□ 1.2
TRAF4-203ENST00000394925 DHCR24Q15392 516 aa22.54■■□□□ 1.2
TRAF4-203ENST00000394925 MDH1BQ5I0G3 518 aa22.54■■□□□ 1.2
TRAF4-203ENST00000394925 CBWD2Q8IUF1 395 aa22.54■■□□□ 1.2
TRAF4-203ENST00000394925 ALLCQ8N6M5 410 aa22.54■■□□□ 1.2
TRAF4-203ENST00000394925 TXNDC5Q8NBS9 432 aaKnown RBP22.54■■□□□ 1.2
TRAF4-203ENST00000394925 RLN3Q8WXF3 142 aa22.54■■□□□ 1.2
TRAF4-203ENST00000394925 TTLL2Q9BWV7 592 aa22.54■■□□□ 1.2
TRAF4-203ENST00000394925 EHD2Q9NZN4 543 aa22.54■■□□□ 1.2
TRAF4-203ENST00000394925 MYO18AQ92614 2054 aaKnown RBP22.53■■□□□ 1.2
TRAF4-203ENST00000394925 AKAP13Q12802 2813 aa22.53■■□□□ 1.2
TRAF4-203ENST00000394925 F8VP50 259 aa22.53■■□□□ 1.2
TRAF4-203ENST00000394925 KIAA0391O15091 583 aaKnown RBP22.53■■□□□ 1.2
TRAF4-203ENST00000394925 KLF8O95600 359 aaPredicted RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms