RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 SRSF5Q13243 272 aaKnown RBP27.26■■□□□ 1.96
KRT18-201ENST00000388835 TMEM196Q5HYL7 178 aa27.26■■□□□ 1.96
KRT18-201ENST00000388835 PKN3Q6P5Z2 889 aa27.26■■□□□ 1.96
KRT18-201ENST00000388835 SYNPOQ8N3V7 929 aa27.26■■□□□ 1.96
KRT18-201ENST00000388835 SH3RF2Q8TEC5 729 aa27.26■■□□□ 1.96
KRT18-201ENST00000388835 PARD3BQ8TEW8 1205 aa27.26■■□□□ 1.96
KRT18-201ENST00000388835 SMYD3Q9H7B4 428 aa27.26■■□□□ 1.96
KRT18-201ENST00000388835 TRPM5Q9NZQ8 1165 aa27.26■■□□□ 1.96
KRT18-201ENST00000388835 STAU1O95793 577 aaKnown RBP27.26■■□□□ 1.95
KRT18-201ENST00000388835 FAM163BP0C2L3 166 aa27.26■■□□□ 1.95
KRT18-201ENST00000388835 RAP1GAPP47736 663 aa27.26■■□□□ 1.95
KRT18-201ENST00000388835 IFNAR2P48551 515 aa27.26■■□□□ 1.95
KRT18-201ENST00000388835 CACNA2D1P54289 1103 aa27.26■■□□□ 1.95
KRT18-201ENST00000388835 CDH8P55286 799 aa27.26■■□□□ 1.95
KRT18-201ENST00000388835 USP4Q13107 963 aa27.26■■□□□ 1.95
KRT18-201ENST00000388835 ZNF699Q32M78 642 aa27.26■■□□□ 1.95
KRT18-201ENST00000388835 NAIF1Q69YI7 327 aaPredicted RBP27.26■■□□□ 1.95
KRT18-201ENST00000388835 SCARA5Q6ZMJ2 495 aa27.26■■□□□ 1.95
KRT18-201ENST00000388835 CPA6Q8N4T0 437 aa27.26■■□□□ 1.95
KRT18-201ENST00000388835 OSCP1Q8WVF1 389 aa27.26■■□□□ 1.95
KRT18-201ENST00000388835 ZNF518BQ9C0D4 1074 aa27.26■■□□□ 1.95
KRT18-201ENST00000388835 DMAC2Q9NW81 257 aa27.26■■□□□ 1.95
KRT18-201ENST00000388835 USP25Q9UHP3 1055 aa27.26■■□□□ 1.95
KRT18-201ENST00000388835 GMEB2Q9UKD1 530 aa27.26■■□□□ 1.95
KRT18-201ENST00000388835 TRDMT1O14717 391 aaKnown RBP27.25■■□□□ 1.95
KRT18-201ENST00000388835 PAPSS2O95340 614 aaPredicted RBP27.25■■□□□ 1.95
KRT18-201ENST00000388835 IFRD2Q12894 506 aaPredicted RBP27.25■■□□□ 1.95
KRT18-201ENST00000388835 B3GALNT2Q8NCR0 500 aa27.25■■□□□ 1.95
KRT18-201ENST00000388835 B3GNT5Q9BYG0 378 aa27.25■■□□□ 1.95
KRT18-201ENST00000388835 KCTD10Q9H3F6 313 aa27.25■■□□□ 1.95
KRT18-201ENST00000388835 ECT2Q9H8V3 914 aa27.25■■□□□ 1.95
KRT18-201ENST00000388835 FBRSL1Q9HCM7 1045 aaKnown RBP27.25■■□□□ 1.95
KRT18-201ENST00000388835 HPSEQ9Y251 543 aa27.25■■□□□ 1.95
KRT18-201ENST00000388835 HRO43593 1189 aa27.24■■□□□ 1.95
KRT18-201ENST00000388835 ABL1P00519 1130 aa27.24■■□□□ 1.95
KRT18-201ENST00000388835 EGFP01133 1207 aa27.24■■□□□ 1.95
KRT18-201ENST00000388835 GALK1P51570 392 aa27.24■■□□□ 1.95
KRT18-201ENST00000388835 DLG4P78352 724 aa27.24■■□□□ 1.95
KRT18-201ENST00000388835 AMPD2Q01433 879 aa27.24■■□□□ 1.95
KRT18-201ENST00000388835 NCOA4Q13772 614 aa27.24■■□□□ 1.95
KRT18-201ENST00000388835 C8orf48Q96LL4 319 aa27.24■■□□□ 1.95
KRT18-201ENST00000388835 CEP295NLQ96MC4 621 aa27.24■■□□□ 1.95
KRT18-201ENST00000388835 TMEM30AQ9NV96 361 aa27.24■■□□□ 1.95
KRT18-201ENST00000388835 C4BPAP04003 597 aaKnown RBP27.23■■□□□ 1.95
KRT18-201ENST00000388835 NR3C1P04150 777 aa27.23■■□□□ 1.95
KRT18-201ENST00000388835 RPN1P04843 607 aaKnown RBP27.23■■□□□ 1.95
KRT18-201ENST00000388835 GJA4P35212 333 aa27.23■■□□□ 1.95
KRT18-201ENST00000388835 SYKP43405 635 aa27.23■■□□□ 1.95
KRT18-201ENST00000388835 NDUFA8P51970 172 aa27.23■■□□□ 1.95
KRT18-201ENST00000388835 SIM2Q14190 667 aaPredicted RBP27.23■■□□□ 1.95
KRT18-201ENST00000388835 ZNF667Q5HYK9 610 aa27.23■■□□□ 1.95
KRT18-201ENST00000388835 ERMP1Q7Z2K6 904 aa27.23■■□□□ 1.95
KRT18-201ENST00000388835 LONP2Q86WA8 852 aa27.23■■□□□ 1.95
KRT18-201ENST00000388835 SLC9A9Q8IVB4 645 aa27.23■■□□□ 1.95
KRT18-201ENST00000388835 TTLL2Q9BWV7 592 aa27.23■■□□□ 1.95
KRT18-201ENST00000388835 ELOVL4Q9GZR5 314 aa27.23■■□□□ 1.95
KRT18-201ENST00000388835 EHD2Q9NZN4 543 aa27.23■■□□□ 1.95
KRT18-201ENST00000388835 USP18Q9UMW8 372 aa27.23■■□□□ 1.95
KRT18-201ENST00000388835 VNN1O95497 513 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 PRR29P0C7W0 189 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 AP3M2P53677 418 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 NOP14P78316 857 aaKnown RBP27.22■■□□□ 1.95
KRT18-201ENST00000388835 FOXK2Q01167 660 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 CEP135Q66GS9 1140 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 ATP2A3Q93084 1043 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 P2RY13Q9BPV8 354 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 LINC00597Q9H2U6 94 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 ARHGAP26Q9UNA1 814 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 CEP250Q9BV73 2442 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 PDXKO00764 312 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 RNF40O75150 1001 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 PDE6CP51160 858 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 CLDN10P78369 228 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 EML3Q32P44 896 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 MED10Q9BTT4 135 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 VRTNQ9H8Y1 702 aa27.22■■□□□ 1.95
KRT18-201ENST00000388835 ZNF840PA6NDX5 716 aa27.21■■□□□ 1.95
KRT18-201ENST00000388835 PXNP49023 591 aaPredicted RBP27.21■■□□□ 1.95
KRT18-201ENST00000388835 ZXDBP98169 803 aa27.21■■□□□ 1.95
KRT18-201ENST00000388835 TAF10Q12962 218 aa27.21■■□□□ 1.95
KRT18-201ENST00000388835 RSPO4Q2I0M5 234 aaPredicted RBP27.21■■□□□ 1.95
KRT18-201ENST00000388835 LAIR1Q6GTX8 287 aa27.21■■□□□ 1.95
KRT18-201ENST00000388835 GPR161Q8N6U8 529 aaKnown RBP27.21■■□□□ 1.95
KRT18-201ENST00000388835 SDCBP2Q9H190 292 aa27.21■■□□□ 1.95
KRT18-201ENST00000388835 PARD6AQ9NPB6 346 aa27.21■■□□□ 1.95
KRT18-201ENST00000388835 POLR3BQ9NW08 1133 aaPredicted RBP27.21■■□□□ 1.95
KRT18-201ENST00000388835 GTF3C3Q9Y5Q9 886 aa27.21■■□□□ 1.95
KRT18-201ENST00000388835 MYL1P05976 194 aa27.2■■□□□ 1.94
KRT18-201ENST00000388835 SPEM2Q0P670 501 aa27.2■■□□□ 1.94
KRT18-201ENST00000388835 RNF38Q9H0F5 515 aa27.2■■□□□ 1.94
KRT18-201ENST00000388835 LEFTY2O00292 366 aa27.19■■□□□ 1.94
KRT18-201ENST00000388835 CALUO43852 315 aaPredicted RBP27.19■■□□□ 1.94
KRT18-201ENST00000388835 DRD1P21728 446 aa27.19■■□□□ 1.94
KRT18-201ENST00000388835 CEP68Q76N32 757 aa27.19■■□□□ 1.94
KRT18-201ENST00000388835 DGLUCYQ7Z3D6 616 aa27.19■■□□□ 1.94
KRT18-201ENST00000388835 CD101Q93033 1021 aa27.19■■□□□ 1.94
KRT18-201ENST00000388835 CCDC47Q96A33 483 aaKnown RBP27.19■■□□□ 1.94
KRT18-201ENST00000388835 SLITRK1Q96PX8 696 aa27.19■■□□□ 1.94
KRT18-201ENST00000388835 KCNK16Q96T55 309 aa27.19■■□□□ 1.94
KRT18-201ENST00000388835 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.19■■□□□ 1.949e-6■■□□□ 13.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms