RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 METTL21CQ5VZV1 264 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 RTL3Q8N8U3 475 aaKnown RBP6.81□□□□□ -1.32
VPS13B-202ENST00000357162 MAB21L3Q8N8X9 362 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 PSMA8Q8TAA3 256 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 COA1Q9GZY4 146 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 GDF3Q9NR23 364 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 BTBD3Q9Y2F9 522 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 DNAJB5O75953 348 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 KCNA2P16389 499 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 AKT1P31749 480 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 IZUMO2Q6UXV1 221 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 REXO1L1PQ8IX06 675 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 GPD1LQ8N335 351 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 SNX31Q8N9S9 440 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 PHC3Q8NDX5 983 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 EZH1Q92800 747 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-202ENST00000357162 MYDGFQ969H8 173 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 C3orf18Q9UK00 162 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 HEATR9A2RTY3 570 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 DLGAP3O95886 979 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 RECQLP46063 649 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 GALCP54803 685 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 ZNF844Q08AG5 666 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 NFX1Q12986 1120 aaKnown RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 IMPG1Q17R60 797 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 TTLL9Q3SXZ7 439 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 PLEKHA7Q6IQ23 1121 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 RAPGEF5Q92565 580 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 SEC31BQ9NQW1 1179 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 MCM8Q9UJA3 840 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 PHGDHO43175 533 aaKnown RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 GJC2Q5T442 439 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 LPCAT2Q7L5N7 544 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 DHDDSQ86SQ9 333 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 LRRC49Q8IUZ0 686 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 WDR36Q8NI36 951 aaKnown RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 ITFG2Q969R8 447 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 THRAP3Q9Y2W1 955 aaKnown RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 CCDC154A6NI56 674 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 TMEM114B3SHH9 223 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 PIK3CDO00329 1044 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 MYCNP04198 464 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 GNA15P30679 374 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 PTDSS1P48651 473 aaKnown RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 CDH6P55285 790 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 BROXQ5VW32 411 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 ADHFE1Q8IWW8 467 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 RORBQ92753 470 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 ZBTB10Q96DT7 871 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 DEPDC7Q96QD5 511 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 DOPEY1Q5JWR5 2465 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 E5RI56 91 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 H3BMM5 538 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 KLHDC7AQ5VTJ3 777 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 XKRXQ6PP77 449 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 GJD3Q8N144 294 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 METTL13Q8N6R0 699 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 FAM45AQ8TCE6 357 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 COMMD8Q9NX08 183 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 GUCY1B2O75343 617 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 FBXO21O94952 628 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 ERBB2P04626 1255 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 SLC9A1P19634 815 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 PAX3P23760 479 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 PRKCIP41743 596 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 MEI1Q5TIA1 1274 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 ZDHHC17Q8IUH5 632 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 HELQQ8TDG4 1101 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 Q96MT0 163 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 HBS1LQ9Y450 684 aaKnown RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 TAF4O00268 1085 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 C2CD2LO14523 706 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 MYCLP12524 364 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 PRDX6P30041 224 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 C6orf10Q5SRN2 563 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 CSADQ9Y600 493 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 TRAFD1O14545 582 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 FASP25445 335 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 GMFBP60983 142 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 ACVR2BQ13705 512 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 INSCQ1MX18 579 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 TKFCQ3LXA3 575 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 ZC3H12BQ5HYM0 836 aaKnown RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 SYCE2Q6PIF2 218 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 TLK2Q86UE8 772 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 C19orf18Q8NEA5 215 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 ANKEF1Q9NU02 776 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 TRIM13O60858 407 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 ITGA10O75578 1167 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 TCEA3O75764 348 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 AP1G2O75843 785 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 VCPP55072 806 aaKnown RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 EIF3EP60228 445 aaKnown RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 GCNT1Q02742 428 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 SPDYE1Q8NFV5 336 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 OXNAD1Q96HP4 312 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 YTHDF1Q9BYJ9 559 aaKnown RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 KLHL25Q9H0H3 589 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 ACAD9Q9H845 621 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 DNALI1O14645 258 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms