RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 GNA15P30679 374 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 DSG1Q02413 1049 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 IZUMO3Q5VZ72 239 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 CIAPIN1Q6FI81 312 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 PPP1R2P3Q6NXS1 205 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 TMEM53Q6P2H8 277 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 CCDC80Q76M96 950 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 PRR11Q96HE9 360 aaPredicted RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 GRIP2Q9C0E4 1043 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 ST6GALNAC4Q9H4F1 302 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 FBXO6Q9NRD1 293 aaPredicted RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 NDE1Q9NXR1 346 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 BTBD7Q9P203 1132 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 HSFX1Q9UBD0 423 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 AGO2Q9UKV8 859 aaKnown RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 PCDHB2Q9Y5E7 798 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 GOLGA8SH3BPF8 625 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 GOLGA8MH3BSY2 632 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 VWA5AO00534 786 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 XPOTO43592 962 aaKnown RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 DCTN3O75935 186 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 TTC4O95801 387 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 PENKP01210 267 aaPredicted RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 ESRRAP11474 423 aaPredicted RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 UNGP13051 313 aaPredicted RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 PTPN4P29074 926 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 CCND2P30279 289 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 PGM1P36871 562 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 CLCN2P51788 898 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 ACTR2P61160 394 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 RPL7AP62424 266 aaKnown RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 SPDYCQ5MJ68 293 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 NBPF12Q5TAG4 269 aaPredicted RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 RNF43Q68DV7 783 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 ZBTB33Q86T24 672 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 TMCO5AQ8N6Q1 288 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 ENDOVQ8N8Q3 282 aaKnown RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 TMC2Q8TDI7 906 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 CCDC124Q96CT7 223 aaKnown RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 OSBPL8Q9BZF1 889 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 MIS12Q9H081 205 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 C12orf65Q9H3J6 166 aaKnown RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 SMYD3Q9H7B4 428 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 C10orf88Q9H8K7 445 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 JPH1Q9HDC5 661 aaPredicted RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 ARL8BQ9NVJ2 186 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 NINJ2Q9NZG7 142 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 ZNF148Q9UQR1 794 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 SPTLC1O15269 473 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 ATP5HO75947 161 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 HAUS5O94927 633 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 CA4P22748 312 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 IVDP26440 423 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 MTTPP55157 894 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 DYNLT1P63172 113 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 GRAMD1BQ3KR37 738 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 SCARA5Q6ZMJ2 495 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 TRMT10CQ7L0Y3 403 aaKnown RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 EEPD1Q7L9B9 569 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 OR5B17Q8NGF7 314 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 LPAR1Q92633 364 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 SRPK1Q96SB4 655 aaKnown RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 APOBEC3GQ9HC16 384 aaKnown RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 CYP26B1Q9NR63 512 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 RBAKQ9NYW8 714 aaPredicted RBP9.8□□□□□ -0.84
SMG6-202ENST00000354901 WHRNQ9P202 907 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 GJA3Q9Y6H8 435 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 RGS20O76081 388 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 ZFXP17010 805 aaPredicted RBP9.79□□□□□ -0.84
SMG6-202ENST00000354901 ITIH2P19823 946 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 MAP3K10Q02779 954 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 AP1B1Q10567 949 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 CYLC2Q14093 348 aaPredicted RBP9.79□□□□□ -0.84
SMG6-202ENST00000354901 LIN9Q5TKA1 542 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 DPY19L2Q6NUT2 758 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 CCDC62Q6P9F0 684 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 RGS9BPQ6ZS82 235 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 GET4Q7L5D6 327 aaPredicted RBP9.79□□□□□ -0.84
SMG6-202ENST00000354901 VSIG10LQ86VR7 867 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 SESTD1Q86VW0 696 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMG6-202ENST00000354901 DEPTORQ8TB45 409 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 FHDC1Q9C0D6 1143 aaPredicted RBP9.79□□□□□ -0.84
SMG6-202ENST00000354901 SAYSD1Q9NPB0 183 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 SLC9A2Q9UBY0 812 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 FBXO40Q9UH90 709 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 ZNF541Q9H0D2 1346 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 ARHGAP42A6NI28 874 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 H3BRJ5 948 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 GOLGA8RI6L899 631 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 K7ERI5 159 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 DGAT1O75907 488 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 PSAPP07602 524 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 CCDC166P0CW27 439 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 CD151P48509 253 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 ZNF280AP59817 542 aaPredicted RBP9.79□□□□□ -0.84
SMG6-202ENST00000354901 OCRLQ01968 901 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 GCNT1Q02742 428 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 KDSRQ06136 332 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 TNFAIP1Q13829 316 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms