RNA–Protein interactions for RNA: ENST00000327702.11

CACNA1C-201, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-201ENST00000327702 UNC5CLQ8IV45 518 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 SEPT1Q8WYJ6 367 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 MAGED4Q96JG8 741 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 JPH1Q9HDC5 661 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 SNX12Q9UMY4 172 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 SF3B1O75533 1304 aaKnown RBP eCLIP11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 TTC26A0AVF1 554 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 TMEM120BA0PK00 339 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 LBPP18428 481 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 TARSP26639 723 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 CDH18Q13634 790 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 ITGA9Q13797 1035 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 WDR72Q3MJ13 1102 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 MROH9Q5TGP6 573 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 TMEM47Q9BQJ4 181 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 NFKBIZQ9BYH8 718 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 SLC40A1Q9NP59 571 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 SLAIN2Q9P270 581 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 POLR1DQ9Y2S0 133 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 LOC100653049A0A140TA62 436 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 MEI4A8MW99 385 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 TPST1O60507 370 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 KRT34O76011 436 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 EYA4O95677 639 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 AKR1B1P15121 316 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 HNMTP50135 292 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 IL5RAQ01344 420 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 TRAF2Q12933 501 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 TRMT2AQ8IZ69 625 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 METTL5Q9NRN9 209 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 ARHGAP31Q2M1Z3 1444 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 C21orf2O43822 256 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 LARGE1O95461 756 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 RPN2P04844 631 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 TNNI3P19429 210 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 EIF2B2P49770 351 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 PLCL1Q15111 1095 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 BNC2Q6ZN30 1099 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 ATG16L2Q8NAA4 619 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 PPP1R10Q96QC0 940 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 HMG20AQ9NP66 347 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 PCDHA10Q9Y5I2 948 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 A0A087X0T9 212 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 NR5A2O00482 541 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 ECE2O60344 883 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 ENO2P09104 434 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 EPHA7Q15375 998 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 EFHC1Q5JVL4 640 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 CASP12Q6UXS9 341 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 SUGP1Q8IWZ8 645 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 GUF1Q8N442 669 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 RBBP8NLQ8NC74 664 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 SPATA18Q8TC71 538 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 CCDC3Q9BQI4 270 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 NLNQ9BYT8 704 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 OSBPL5Q9H0X9 879 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 OSBPL3Q9H4L5 887 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 SNX13Q9Y5W8 968 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 SNX8Q9Y5X2 465 aa11.22□□□□□ -0.61
CACNA1C-201ENST00000327702 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 GLRA3O75311 464 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 BMP10O95393 424 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 RXRGP48443 463 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 ITGA8P53708 1063 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 RBBP4Q09028 425 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 ZNF177Q13360 481 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 NCOA4Q13772 614 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 TAB1Q15750 504 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 IER5Q5VY09 327 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 SHCBP1LQ9BZQ2 653 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 KCTD10Q9H3F6 313 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 ZBTB1Q9Y2K1 713 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 MBD5Q9P267 1494 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 CYP2D6P10635 497 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 USP11P51784 963 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 ESRP1Q6NXG1 681 aaKnown RBP11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 SPIRE2Q8WWL2 714 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 ZNF669Q96BR6 464 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 RMND5BQ96G75 393 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 C6orf62Q9GZU0 229 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 BARHL2Q9NY43 387 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 ERVV-1B6SEH8 477 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 PSMB9P28065 219 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 PEX5P50542 639 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 NME5P56597 212 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 FAM228AQ86W67 206 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 CAMKK1Q8N5S9 505 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 USP7Q93009 1102 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 OTUD5Q96G74 571 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 HIC2Q96JB3 615 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 SLC9A7Q96T83 725 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 TRIT1Q9H3H1 467 aaKnown RBP11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 EFCAB1Q9HAE3 211 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 KLHL28Q9NXS3 571 aa11.21□□□□□ -0.61
CACNA1C-201ENST00000327702 GNG14A0A1W2PPG7 69 aa11.21□□□□□ -0.62
CACNA1C-201ENST00000327702 EFCAB10A6NFE3 127 aa11.21□□□□□ -0.62
CACNA1C-201ENST00000327702 PDXKO00764 312 aa11.21□□□□□ -0.62
CACNA1C-201ENST00000327702 FGRP09769 529 aa11.21□□□□□ -0.62
CACNA1C-201ENST00000327702 DSG3P32926 999 aa11.21□□□□□ -0.62
CACNA1C-201ENST00000327702 ITGA1P56199 1179 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms