RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 CCSER1Q9C0I3 900 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 ILKAPQ9H0C8 392 aaPredicted RBP11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 DCP1AQ9NPI6 582 aaPredicted RBP11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 FAM153AQ9UHL3 310 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 SPATA2Q9UM82 520 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 SLIT2O94813 1529 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 FAM196BA6NMK8 535 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 RALAP11233 206 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 RGS4P49798 205 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 EPHA7Q15375 998 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 KBTBD12Q3ZCT8 623 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 IRGCQ6NXR0 463 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 SCUBE1Q8IWY4 988 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 WDR48Q8TAF3 677 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 SH3TC2Q8TF17 1288 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 KAT2BQ92831 832 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 ZBED2Q9BTP6 218 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 DYRK4Q9NR20 520 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 MRC1P22897 1456 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 NPHP3-ACAD11A0A0J9YXS1 232 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 DNALI1O14645 258 aaPredicted RBP11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 CPB1P15086 417 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 USP11P51784 963 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 PLIN5Q00G26 463 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 CHRNB3Q05901 458 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 PCSK7Q16549 785 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 KRT78Q8N1N4 520 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 SNX31Q8N9S9 440 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 EFCAB1Q9HAE3 211 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 ARHGEF3Q9NR81 526 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 ALS2Q96Q42 1657 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 TRIM24O15164 1050 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 TMEM253P0C7T8 217 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 THRAP10827 490 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 CHRNA5P30532 468 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 HPCAP84074 193 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 FUT11Q495W5 492 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 IZUMO2Q6UXV1 221 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 RBBP8NLQ8NC74 664 aaPredicted RBP11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 FAM129AQ9BZQ8 928 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 SLC7A5P2Q9GIP4 190 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 PABPC3Q9H361 631 aaKnown RBP11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 CIDEBQ9UHD4 219 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 C2CD2Q9Y426 696 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 GOLGA8TH3BQL2 631 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 SMNDC1O75940 238 aaKnown RBP eCLIP11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 STK4Q13043 487 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 COG2Q14746 738 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 PTRHD1Q6GMV3 140 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 SLC16A10Q8TF71 515 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 ROGDIQ9GZN7 287 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 EPS8L2Q9H6S3 715 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 NFKBIL1Q9UBC1 381 aaPredicted RBP11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 FEM1BQ9UK73 627 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 AGAP1Q9UPQ3 857 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 TRPM3Q9HCF6 1732 aaPredicted RBP11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 GYPCP04921 128 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 COILP38432 576 aaPredicted RBP11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 IREB2P48200 963 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 ST13P50502 369 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 ELF3P78545 371 aaPredicted RBP11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 RIPK1Q13546 671 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 ATP1A4Q13733 1029 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 PDIA5Q14554 519 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 DENND1BQ6P3S1 775 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 SPASTQ9UBP0 616 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 CTNNAL1Q9UBT7 734 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 SNX9Q9Y5X1 595 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 GRAP2O75791 330 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 SERPINB5P36952 375 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 PRIM2P49643 509 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 POU4F1Q01851 419 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 ARMC4Q5T2S8 1044 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 SGMS1Q86VZ5 419 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 PPIL6Q8IXY8 311 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 RNF149Q8NC42 400 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 ST13P5Q8NFI4 369 aaPredicted RBP11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 IPMKQ8NFU5 416 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 ZFAND2BQ8WV99 257 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 FAXDC2Q96IV6 333 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 DEPDC7Q96QD5 511 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 APOL5Q9BWW9 433 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 RSAD1Q9HA92 442 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 HOXC10Q9NYD6 342 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 PCDHA10Q9Y5I2 948 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 ZNF609O15014 1411 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 F5H6K3 240 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 ATMINO43313 823 aaPredicted RBP11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 GUCY1A2P33402 732 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 ACOT2P49753 483 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 KLRC3Q07444 240 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 DPYDQ12882 1025 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 MMRN1Q13201 1228 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 R3HDM1Q15032 1099 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 FAM45BPQ6NSW5 357 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 LRRC8DQ7L1W4 858 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 LRRC6Q86X45 466 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 ADGRF4Q8IZF3 695 aa11.13□□□□□ -0.63
PKNOX1-201ENST00000291547 SLC25A41Q8N5S1 370 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms