RNA–Protein interactions for RNA: ENST00000260270.2

FDX1-201, Transcript of ferredoxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FDX1, Length 3,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDX1-201ENST00000260270 ENDOVQ8N8Q3 282 aaKnown RBP17.13■□□□□ 0.33
FDX1-201ENST00000260270 SHCBP1Q8NEM2 672 aa17.13■□□□□ 0.33
FDX1-201ENST00000260270 ELMO3Q96BJ8 720 aa17.13■□□□□ 0.33
FDX1-201ENST00000260270 DERAQ9Y315 318 aa17.13■□□□□ 0.33
FDX1-201ENST00000260270 TEX264Q9Y6I9 313 aa17.13■□□□□ 0.33
FDX1-201ENST00000260270 C2CD2LO14523 706 aa17.13■□□□□ 0.33
FDX1-201ENST00000260270 CHADO15335 359 aa17.13■□□□□ 0.33
FDX1-201ENST00000260270 C22orf31O95567 290 aa17.13■□□□□ 0.33
FDX1-201ENST00000260270 POLR2BP30876 1174 aaKnown RBP17.13■□□□□ 0.33
FDX1-201ENST00000260270 SLC9A4Q6AI14 798 aa17.13■□□□□ 0.33
FDX1-201ENST00000260270 PWWP2AQ96N64 755 aa17.13■□□□□ 0.33
FDX1-201ENST00000260270 SPATC1LQ9H0A9 340 aa17.13■□□□□ 0.33
FDX1-201ENST00000260270 PRDM16Q9HAZ2 1276 aa17.13■□□□□ 0.33
FDX1-201ENST00000260270 IFT122Q9HBG6 1241 aa17.13■□□□□ 0.33
FDX1-201ENST00000260270 TRUB2O95900 331 aaKnown RBP17.12■□□□□ 0.33
FDX1-201ENST00000260270 KLHL38Q2WGJ6 581 aa17.12■□□□□ 0.33
FDX1-201ENST00000260270 ATP13A4Q4VNC1 1196 aa17.12■□□□□ 0.33
FDX1-201ENST00000260270 DENND1BQ6P3S1 775 aa17.12■□□□□ 0.33
FDX1-201ENST00000260270 UTP4Q969X6 686 aaKnown RBP17.12■□□□□ 0.33
FDX1-201ENST00000260270 ECT2Q9H8V3 914 aa17.12■□□□□ 0.33
FDX1-201ENST00000260270 SAR1AQ9NR31 198 aa17.12■□□□□ 0.33
FDX1-201ENST00000260270 LRRIQ4A6NIV6 560 aa17.12■□□□□ 0.33
FDX1-201ENST00000260270 H0Y3Z8 333 aa17.12■□□□□ 0.33
FDX1-201ENST00000260270 CTCFP49711 727 aaPredicted RBP17.12■□□□□ 0.33
FDX1-201ENST00000260270 ZNF143P52747 638 aaPredicted RBP17.12■□□□□ 0.33
FDX1-201ENST00000260270 SLC45A4Q5BKX6 768 aa17.12■□□□□ 0.33
FDX1-201ENST00000260270 C4orf22Q6V702 233 aa17.12■□□□□ 0.33
FDX1-201ENST00000260270 PLAC1Q9HBJ0 212 aa17.12■□□□□ 0.33
FDX1-201ENST00000260270 C2CD2Q9Y426 696 aa17.12■□□□□ 0.33
FDX1-201ENST00000260270 KLHL33A6NCF5 533 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 ARIH2O95376 493 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 SPARCL1Q14515 664 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 FASTKD3Q14CZ7 662 aaKnown RBP17.11■□□□□ 0.33
FDX1-201ENST00000260270 SAMD1Q6SPF0 538 aaPredicted RBP17.11■□□□□ 0.33
FDX1-201ENST00000260270 MAMDC4Q6UXC1 1216 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 PASD1Q8IV76 773 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 GPC2Q8N158 579 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.11■□□□□ 0.33
FDX1-201ENST00000260270 CDT1Q9H211 546 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 FGFR1P11362 822 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 GNAT1P11488 350 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 HIRAP54198 1017 aaPredicted RBP17.11■□□□□ 0.33
FDX1-201ENST00000260270 TBC1D10BQ4KMP7 808 aaPredicted RBP17.11■□□□□ 0.33
FDX1-201ENST00000260270 TREML2Q5T2D2 321 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 C1orf127Q8N9H9 656 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 ATP11CQ8NB49 1132 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 STK32AQ8WU08 396 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 HEMGNQ9BXL5 484 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 USH1CQ9Y6N9 552 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 PFKMP08237 780 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 T-ENOLP0DO92 83 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 RFC1P35251 1148 aaPredicted RBP17.11■□□□□ 0.33
FDX1-201ENST00000260270 MXRA7P84157 204 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 RNASELQ05823 741 aaKnown RBP17.11■□□□□ 0.33
FDX1-201ENST00000260270 MAPK6Q16659 721 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 LCLAT1Q6UWP7 414 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 RAB3IL1Q8TBN0 382 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 CENPIQ92674 756 aaPredicted RBP17.11■□□□□ 0.33
FDX1-201ENST00000260270 MYLK2Q9H1R3 596 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 BATF3Q9NR55 127 aa17.11■□□□□ 0.33
FDX1-201ENST00000260270 C2CD4BA6NLJ0 364 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 RASA4BC9J798 803 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 RASA4O43374 803 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 SMNDC1O75940 238 aaKnown RBP eCLIP17.1■□□□□ 0.33
FDX1-201ENST00000260270 ATP5BP06576 529 aaKnown RBP17.1■□□□□ 0.33
FDX1-201ENST00000260270 KRT10P13645 584 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 CCND1P24385 295 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 PRKCHP24723 683 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 STIP1P31948 543 aaKnown RBP17.1■□□□□ 0.33
FDX1-201ENST00000260270 ANKRD20A2Q5SQ80 823 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 ANKRD20A1Q5TYW2 823 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 ANGEL2Q5VTE6 544 aaKnown RBP17.1■□□□□ 0.33
FDX1-201ENST00000260270 ANKRD20A3Q5VUR7 823 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 ZBTB8OSQ8IWT0 167 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 TRPM4Q8TD43 1214 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 TSC22D3Q99576 134 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 TRABDQ9H4I3 376 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 RSAD1Q9HA92 442 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 USP29Q9HBJ7 922 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 GBA2Q9HCG7 927 aaPredicted RBP17.1■□□□□ 0.33
FDX1-201ENST00000260270 PNMA3Q9UL41 463 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 CHKBQ9Y259 395 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 BCLAF3A2AJT9 711 aaKnown RBP17.1■□□□□ 0.33
FDX1-201ENST00000260270 CXCL11O14625 94 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 KRT16P08779 473 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 RPL22P35268 128 aaKnown RBP17.1■□□□□ 0.33
FDX1-201ENST00000260270 GDF10P55107 478 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 TFDP1Q14186 410 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 STILQ15468 1287 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 MSS51Q4VC12 460 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 STXBP5Q5T5C0 1151 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 SLC30A9Q6PML9 568 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 MCUQ8NE86 351 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 TSPAN18Q96SJ8 248 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 CPXM1Q96SM3 734 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 SAYSD1Q9NPB0 183 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 NKIRAS1Q9NYS0 192 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 KANSL3Q9P2N6 904 aa17.1■□□□□ 0.33
FDX1-201ENST00000260270 EXOC1LA0A1B0GW35 172 aa17.09■□□□□ 0.33
FDX1-201ENST00000260270 MDM4O15151 490 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms