RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 SF3B1O75533 1304 aaKnown RBP eCLIP9.96□□□□□ -0.82
NIP7-202ENST00000254941 ZNF638Q14966 1978 aaKnown RBP9.96□□□□□ -0.82
NIP7-202ENST00000254941 PAPSS1O43252 624 aaPredicted RBP9.96□□□□□ -0.82
NIP7-202ENST00000254941 BEST1O76090 585 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 FAM200BP0CF97 657 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 ALDH7A1P49419 539 aaKnown RBP9.96□□□□□ -0.82
NIP7-202ENST00000254941 BCAR1P56945 870 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 DEFB103AP81534 67 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 TSPY1Q01534 308 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 OGDHQ02218 1023 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 ITIH3Q06033 890 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 ELAVL2Q12926 359 aaKnown RBP9.96□□□□□ -0.82
NIP7-202ENST00000254941 FAM102AQ5T9C2 384 aaPredicted RBP9.96□□□□□ -0.82
NIP7-202ENST00000254941 CCDC181Q5TID7 509 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 DCAF12L1Q5VU92 463 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 OR6B2Q6IFH4 312 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 OLFML1Q6UWY5 402 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 FAM183BPQ6ZVS7 135 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 FAM35AQ86V20 835 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 PIGZQ86VD9 579 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 LRRTM3Q86VH5 581 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 SCUBE3Q8IX30 993 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 KCTD13Q8WZ19 329 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 KRT35Q92764 455 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 SMARCD1Q96GM5 515 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 MS4A14Q96JA4 679 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 MED10Q9BTT4 135 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 GPR62Q9BZJ7 368 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 RC3H2Q9HBD1 1191 aaKnown RBP9.96□□□□□ -0.82
NIP7-202ENST00000254941 CSNK1G1Q9HCP0 422 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 METTL5Q9NRN9 209 aaKnown RBP9.96□□□□□ -0.82
NIP7-202ENST00000254941 KRT82Q9NSB4 513 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 TMEM59LQ9UK28 342 aa9.96□□□□□ -0.82
NIP7-202ENST00000254941 GREB1Q4ZG55 1949 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 PIK3R2O00459 728 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 ACRP10323 421 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 FGFR3P22607 806 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 SCNN1AP37088 669 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 PAFAH1B1P43034 410 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 MARCKSL1P49006 195 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 TUBB4BP68371 445 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 SLC6A3Q01959 620 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 MRPL58Q14197 206 aaKnown RBP9.95□□□□□ -0.82
NIP7-202ENST00000254941 VARS2Q5ST30 1063 aaKnown RBP9.95□□□□□ -0.82
NIP7-202ENST00000254941 FAM171A1Q5VUB5 890 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 FUT10Q6P4F1 479 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 RSRC2Q7L4I2 434 aaKnown RBP9.95□□□□□ -0.82
NIP7-202ENST00000254941 ARCQ7LC44 396 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 TMEM173Q86WV6 379 aaPredicted RBP9.95□□□□□ -0.82
NIP7-202ENST00000254941 RASGEF1CQ8N431 466 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 JOSD2Q8TAC2 188 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 ACTRT1Q8TDG2 376 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 MYLPFQ96A32 169 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 PIWIL1Q96J94 861 aaKnown RBP9.95□□□□□ -0.82
NIP7-202ENST00000254941 TMEM209Q96SK2 561 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 UBXN6Q9BZV1 441 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 CWH43Q9H720 699 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 TMEM30AQ9NV96 361 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 TMLHEQ9NVH6 421 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 PRKAG2Q9UGJ0 569 aa9.95□□□□□ -0.82
NIP7-202ENST00000254941 TTC7AQ9ULT0 858 aaPredicted RBP9.95□□□□□ -0.82
NIP7-202ENST00000254941 C2CD4BA6NLJ0 364 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 NT5C1B-RDH14C9J2C7 533 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 F8VP50 259 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 PSTPIP1O43586 416 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 CEP104O60308 925 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 AP1G2O75843 785 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 EFEMP2O95967 443 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 PBX3P40426 434 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 MAP3K7CLP57077 242 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 PPIGQ13427 754 aaKnown RBP eCLIP9.94□□□□□ -0.82
NIP7-202ENST00000254941 ACAP1Q15027 740 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 DAB2IPQ5VWQ8 1189 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 C16orf59Q7L2K0 433 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 SLC26A9Q7LBE3 791 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 EMC1Q8N766 993 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 SPATA4Q8NEY3 305 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 ZMIZ2Q8NF64 920 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 KHSRPQ92945 711 aaKnown RBP eCLIP9.94□□□□□ -0.82
NIP7-202ENST00000254941 SMOQ99835 787 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 ZCWPW1Q9H0M4 648 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 EHD2Q9NZN4 543 aa9.94□□□□□ -0.82
NIP7-202ENST00000254941 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.94□□□□□ -0.82
NIP7-202ENST00000254941 LCP1P13796 627 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 BDNFP23560 247 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 PSMA2P25787 234 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 CDR1P51861 262 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 ZNF143P52747 638 aaPredicted RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 CACNA2D1P54289 1103 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 RWDD2BP57060 319 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 ADIGQ0VDE8 80 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 ERCC6LQ2NKX8 1250 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 RAB41Q5JT25 222 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 LRRC38Q5VT99 294 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 CC2D1AQ6P1N0 951 aaPredicted RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 C4orf50Q6ZRC1 276 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 OTOP2Q7RTS6 562 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 TMCO2Q7Z6W1 182 aaPredicted RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 RHOT1Q8IXI2 618 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 CMTR2Q8IYT2 770 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms