RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Gm10436L7N1Y3 520 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Myo1gQ5SUA5 1024 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Map2k2Q63932 401 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Map3k10Q66L42 940 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Nsun6Q7TS68 476 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 RbakQ8BQC8 711 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Nudt8Q9CR24 210 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Slxl1Q9D515 155 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 SmapQ9R0P4 181 aaKnown RBP11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Srsf11E9Q6E5 511 aaKnown RBP11.77□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ppargc1aO70343 797 aa11.77□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Hsd17b2P51658 381 aa11.77□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Samd11Q1RNF8 542 aa11.77□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Esyt3Q5DTI8 891 aa11.77□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Foxn1Q61575 648 aa11.77□□□□□ -0.52
Topbp1-201ENSMUST00000035164 HltfQ6PCN7 1003 aa11.77□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Nemp1Q6ZQE4 437 aa11.77□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lin52Q8CD94 116 aa11.77□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Tdrd7Q8K1H1 1086 aaKnown RBP11.77□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ttc30a1Q99J38 664 aa11.77□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Tspan17Q9D7W4 270 aa11.77□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Msh5Q9QUM7 833 aa11.77□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rpl5P47962 297 aaKnown RBP11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gpsm3Q3U1Z5 159 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 1810065E05RikQ5NC41 235 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 CapslQ6P8Y1 208 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Raver2Q7TPD6 673 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Olfr670Q7TRP3 312 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Tmem39bQ810L4 492 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Slc9a9Q8BZ00 644 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Nudt13Q8JZU0 352 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 MlklQ9D2Y4 472 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ybx3Q9JKB3 361 aaKnown RBP11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Lrp6O88572 1613 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Rap1gapA2ALS5 663 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 StrnO55106 780 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Polr1bP70700 1135 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Grb7Q03160 535 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Prkag2Q91WG5 566 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Olig1Q9JKN5 260 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Abca3Q8R420 1704 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Topaz1E5FYH1 1653 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Pknox1O70477 436 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Fgfr1P16092 822 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Tsta3P23591 321 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Phactr1Q2M3X8 580 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ccdc28bQ8CEG5 200 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 MceeQ9D1I5 178 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Zfyve19Q9DAZ9 389 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Rsc1a1Q9ER99 582 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Cyp39a1Q9JKJ9 470 aa11.77□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Elk4P41158 430 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 SftpdP50404 374 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 NfiaQ02780 532 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mark2Q05512 776 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mical2Q8BML1 960 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ptrh1Q8BW00 204 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Hdhd5Q91WM2 419 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Chst12Q99LL3 419 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Nuf2Q99P69 463 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gm44511A0A0N4SW10 223 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mettl17Q3U2U7 461 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mgat5Q8R4G6 740 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Zcrb1Q9CZ96 217 aaKnown RBP11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Rnf225Q9D7D1 332 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 XdhQ00519 1335 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gm4846B2RWH8 538 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Prdm15E9Q8T2 1174 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 1700122O11RikJ3QPW6 241 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 PrkceP16054 737 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mmp14P53690 582 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Siah1bQ06985 282 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Krt32Q62168 407 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 E2f7Q6S7F2 904 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Rhbdf2Q80WQ6 827 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Stk32aQ8BGW6 398 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Prpsap2Q8R574 369 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mospd1Q8VEL0 213 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Trpv6Q91WD2 767 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ndufaf1Q9CWX2 328 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gm21973F6WEZ7 68 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Adam7O35227 789 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Nek2O35942 443 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Top3aO70157 1003 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Hcn2O88703 863 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 PrkchP23298 683 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Il1rapl1P59823 695 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Xlr3aQ60595 226 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Cand2Q6ZQ73 1235 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Klhl38Q8BSF5 581 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ccdc90bQ8C3X2 256 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 TwnkQ8CIW5 685 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Trpd52l3Q9CQ14 231 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mrpl4Q9DCU6 294 aaKnown RBP11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Tk2Q9R088 270 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Unc13bQ9Z1N9 1602 aa11.76□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Adam15O88839 864 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Slc1a2P43006 572 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Tulp2P46686 562 aa11.75□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gpc4P51655 557 aa11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms