RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C TOM7P53507 60 aa3.35□□□□□ -1.87
VHS3YOR054C AIM11P87275 137 aa3.35□□□□□ -1.87
VHS3YOR054C UPS1Q05776 175 aa3.35□□□□□ -1.87
VHS3YOR054C DAD1Q12248 94 aa3.35□□□□□ -1.87
VHS3YOR054C IRA2P19158 3079 aa3.34□□□□□ -1.87
VHS3YOR054C MRS3P10566 314 aa3.34□□□□□ -1.87
VHS3YOR054C GPI18P38211 433 aa3.34□□□□□ -1.87
VHS3YOR054C DSE2P38844 325 aa3.34□□□□□ -1.87
VHS3YOR054C MRPL49P40858 161 aaPredicted RBP3.34□□□□□ -1.87
VHS3YOR054C FIP1P45976 327 aa3.34□□□□□ -1.87
VHS3YOR054C TDA7P53882 636 aaPredicted RBP3.34□□□□□ -1.87
VHS3YOR054C COX12Q01519 83 aa3.34□□□□□ -1.87
VHS3YOR054C NCE101Q02820 53 aa3.34□□□□□ -1.87
VHS3YOR054C YHR139C-AO13536 103 aa3.34□□□□□ -1.88
VHS3YOR054C INO2P26798 304 aa3.34□□□□□ -1.88
VHS3YOR054C YHL042WP38729 150 aa3.34□□□□□ -1.88
VHS3YOR054C TIM10P87108 93 aa3.34□□□□□ -1.88
VHS3YOR054C YMR317WQ04893 1140 aa3.34□□□□□ -1.88
VHS3YOR054C YMR320WQ04897 101 aa3.34□□□□□ -1.88
VHS3YOR054C YLR042CQ07990 161 aa3.34□□□□□ -1.88
VHS3YOR054C Q0255P03881 472 aa3.33□□□□□ -1.88
VHS3YOR054C RPL2AP0CX45 254 aaKnown RBP3.33□□□□□ -1.88
VHS3YOR054C RPL2BP0CX46 254 aaKnown RBP3.33□□□□□ -1.88
VHS3YOR054C HSP12P22943 109 aaKnown RBP3.33□□□□□ -1.88
VHS3YOR054C ROX3P25046 220 aa3.33□□□□□ -1.88
VHS3YOR054C YCR006CP25350 157 aa3.33□□□□□ -1.88
VHS3YOR054C YCR050CP25630 102 aa3.33□□□□□ -1.88
VHS3YOR054C SMP1P38128 452 aa3.33□□□□□ -1.88
VHS3YOR054C YNR077CP53758 84 aa3.33□□□□□ -1.88
VHS3YOR054C GPI19Q04082 140 aa3.33□□□□□ -1.88
VHS3YOR054C YHP1Q04116 353 aa3.33□□□□□ -1.88
VHS3YOR054C RPC11Q04307 110 aaPredicted RBP3.33□□□□□ -1.88
VHS3YOR054C POL2P21951 2222 aaKnown RBP3.33□□□□□ -1.88
VHS3YOR054C MDM35O60200 86 aa3.32□□□□□ -1.88
VHS3YOR054C RPL30P14120 105 aaKnown RBP3.32□□□□□ -1.88
VHS3YOR054C TOM6P33448 61 aa3.32□□□□□ -1.88
VHS3YOR054C OST1P41543 476 aaKnown RBP3.32□□□□□ -1.88
VHS3YOR054C VEL1P53058 206 aa3.32□□□□□ -1.88
VHS3YOR054C RXT3Q07458 294 aa3.32□□□□□ -1.88
VHS3YOR054C FIT2Q08906 153 aa3.32□□□□□ -1.88
VHS3YOR054C KTI11Q3E840 82 aa3.32□□□□□ -1.88
VHS3YOR054C YKR032WP36127 104 aa3.32□□□□□ -1.88
VHS3YOR054C FHN1P53279 174 aa3.32□□□□□ -1.88
VHS3YOR054C YDR102CQ03864 110 aa3.32□□□□□ -1.88
VHS3YOR054C YPL261CQ08976 102 aa3.32□□□□□ -1.88
VHS3YOR054C YPL038W-AQ3E7B4 63 aa3.32□□□□□ -1.88
VHS3YOR054C NCA3P46955 337 aa3.31□□□□□ -1.88
VHS3YOR054C IRC19Q07843 230 aa3.31□□□□□ -1.88
VHS3YOR054C YLR112WQ12130 139 aa3.31□□□□□ -1.88
VHS3YOR054C TRP1P00912 224 aa3.31□□□□□ -1.88
VHS3YOR054C YDL022C-AP0C5L6 82 aa3.31□□□□□ -1.88
VHS3YOR054C TOM40P23644 387 aaKnown RBP3.31□□□□□ -1.88
VHS3YOR054C RPL32P38061 130 aaKnown RBP3.31□□□□□ -1.88
VHS3YOR054C YFL051CP43552 160 aa3.31□□□□□ -1.88
VHS3YOR054C UBC13P52490 153 aa3.31□□□□□ -1.88
VHS3YOR054C MIX14Q04341 121 aa3.31□□□□□ -1.88
VHS3YOR054C BOL1Q3E793 110 aa3.31□□□□□ -1.88
VHS3YOR054C YHR214C-EQ8TGK0 99 aa3.31□□□□□ -1.88
VHS3YOR054C VTC1P40046 129 aaRIP-Chip data3.3□□□□□ -1.88not detected
VHS3YOR054C YNL217WP40152 326 aa3.3□□□□□ -1.88
VHS3YOR054C YNL194CP40169 301 aa3.3□□□□□ -1.88
VHS3YOR054C YIA6P40556 373 aa3.3□□□□□ -1.88
VHS3YOR054C YPL278CQ08990 100 aa3.3□□□□□ -1.88
VHS3YOR054C VPS68Q12016 184 aa3.3□□□□□ -1.88
VHS3YOR054C PRP8P33334 2413 aaKnown RBP3.29□□□□□ -1.88
VHS3YOR054C YHL018WP38744 120 aaPredicted RBP3.29□□□□□ -1.88
VHS3YOR054C SVP26P38869 228 aa3.29□□□□□ -1.88
VHS3YOR054C VHS2P40463 436 aa3.29□□□□□ -1.88
VHS3YOR054C MST27P53176 234 aa3.29□□□□□ -1.88
VHS3YOR054C SWS2P53937 143 aa3.29□□□□□ -1.88
VHS3YOR054C YGL258W-AQ3E740 77 aa3.29□□□□□ -1.88
VHS3YOR054C YKL183C-AQ3E765 70 aa3.29□□□□□ -1.88
VHS3YOR054C VPS63O13549 108 aa3.29□□□□□ -1.88
VHS3YOR054C RPS8AP0CX39 200 aaKnown RBP3.29□□□□□ -1.88
VHS3YOR054C RPS8BP0CX40 200 aaKnown RBP3.29□□□□□ -1.88
VHS3YOR054C SGN1P40561 250 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
VHS3YOR054C YMR254CQ04838 102 aa3.29□□□□□ -1.88
VHS3YOR054C TIM22Q12328 207 aa3.29□□□□□ -1.88
VHS3YOR054C YLR412C-AQ3E742 68 aa3.29□□□□□ -1.88
VHS3YOR054C YPR053CQ6Q5F3 151 aa3.29□□□□□ -1.88
VHS3YOR054C GCN1P33892 2672 aaKnown RBP3.28□□□□□ -1.88
VHS3YOR054C AQY1P0CD91 305 aa3.28□□□□□ -1.88
VHS3YOR054C FPR2P32472 135 aa3.28□□□□□ -1.88
VHS3YOR054C FMP46P36141 133 aaKnown RBP3.28□□□□□ -1.88
VHS3YOR054C MBB1P39534 108 aa3.28□□□□□ -1.88
VHS3YOR054C DAD4P69851 72 aa3.28□□□□□ -1.88
VHS3YOR054C YOR029WQ12243 111 aa3.28□□□□□ -1.88
VHS3YOR054C COX17Q12287 69 aa3.28□□□□□ -1.88
VHS3YOR054C YDR381C-AQ3E6R5 114 aa3.28□□□□□ -1.88
VHS3YOR054C KSH1Q8TGJ3 72 aa3.28□□□□□ -1.88
VHS3YOR054C IGO2Q9P305 131 aa3.28□□□□□ -1.88
VHS3YOR054C PBI2P0CT04 75 aaKnown RBP3.27□□□□□ -1.89
VHS3YOR054C HMRA2P0CY13 119 aa3.27□□□□□ -1.89
VHS3YOR054C RRT13P40042 185 aa3.27□□□□□ -1.89
VHS3YOR054C YER079WP40052 210 aaKnown RBP3.27□□□□□ -1.89
VHS3YOR054C YMR141CP40211 102 aa3.27□□□□□ -1.89
VHS3YOR054C RPL15BP54780 204 aaPredicted RBP3.27□□□□□ -1.89
VHS3YOR054C MGR2Q02889 113 aa3.27□□□□□ -1.89
VHS3YOR054C IRC23Q08416 157 aa3.27□□□□□ -1.89
VHS3YOR054C RPL42AP0CX27 106 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms