RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C YEL067CP39978 195 aa7.66□□□□□ -1.18
SPT20YOL148C YIP1P53039 248 aa7.66□□□□□ -1.18
SPT20YOL148C YNR077CP53758 84 aa7.66□□□□□ -1.18
SPT20YOL148C YLR342W-AQ3E810 57 aa7.66□□□□□ -1.18
SPT20YOL148C YPL229WQ99395 206 aa7.66□□□□□ -1.18
SPT20YOL148C BEM2P39960 2167 aaKnown RBP7.66□□□□□ -1.18
SPT20YOL148C HMRA2P0CY13 119 aa7.66□□□□□ -1.18
SPT20YOL148C SUT1P53032 299 aaKnown RBP7.66□□□□□ -1.18
SPT20YOL148C NUP53Q03790 475 aa7.66□□□□□ -1.18
SPT20YOL148C YAL063C-AQ3E791 96 aa7.66□□□□□ -1.18
SPT20YOL148C YLR361C-AQ3E795 98 aa7.66□□□□□ -1.18
SPT20YOL148C MOT3P54785 490 aaKnown RBP7.65□□□□□ -1.18
SPT20YOL148C IGO2Q9P305 131 aa7.65□□□□□ -1.18
SPT20YOL148C RAD6P06104 172 aa7.64□□□□□ -1.19
SPT20YOL148C PHO85P17157 305 aa7.64□□□□□ -1.19
SPT20YOL148C YFL041W-AQ3E817 63 aa7.64□□□□□ -1.19
SPT20YOL148C YCR085WP25650 117 aa7.64□□□□□ -1.19
SPT20YOL148C TOS6P48560 102 aa7.63□□□□□ -1.19
SPT20YOL148C FAB1P34756 2278 aa7.62□□□□□ -1.19
SPT20YOL148C IMG2P25642 146 aaPredicted RBP7.62□□□□□ -1.19
SPT20YOL148C MTC6P38849 526 aa7.62□□□□□ -1.19
SPT20YOL148C YGR039WP53225 103 aa7.62□□□□□ -1.19
SPT20YOL148C COA3Q3E7B2 85 aa7.62□□□□□ -1.19
SPT20YOL148C YBL112CQ3E7Y4 105 aa7.62□□□□□ -1.19
SPT20YOL148C YHR213WP0CI67 198 aa7.62□□□□□ -1.19
SPT20YOL148C MSN1P22148 382 aa7.62□□□□□ -1.19
SPT20YOL148C MRPL24P36525 258 aaPredicted RBP7.62□□□□□ -1.19
SPT20YOL148C LTP1P40347 161 aa7.62□□□□□ -1.19
SPT20YOL148C YDL186WP48568 277 aa7.62□□□□□ -1.19
SPT20YOL148C MOH1P38191 138 aa7.61□□□□□ -1.19
SPT20YOL148C RRT1P38192 103 aa7.61□□□□□ -1.19
SPT20YOL148C FIP1P45976 327 aa7.61□□□□□ -1.19
SPT20YOL148C PIR5P46999 287 aa7.61□□□□□ -1.19
SPT20YOL148C RXT3Q07458 294 aa7.61□□□□□ -1.19
SPT20YOL148C TIM22Q12328 207 aa7.61□□□□□ -1.19
SPT20YOL148C YDL022C-AP0C5L6 82 aa7.6□□□□□ -1.19
SPT20YOL148C SIP18P50263 79 aa7.6□□□□□ -1.19
SPT20YOL148C RRG8Q06109 277 aa7.6□□□□□ -1.19
SPT20YOL148C YFL015CP43578 164 aa7.59□□□□□ -1.19
SPT20YOL148C YMR181CQ03231 154 aa7.59□□□□□ -1.19
SPT20YOL148C IMP2P46972 177 aa7.59□□□□□ -1.19
SPT20YOL148C RNH203Q12338 110 aa7.59□□□□□ -1.19
SPT20YOL148C AGA1P32323 725 aa7.58□□□□□ -1.2
SPT20YOL148C SPI1P40092 148 aa7.58□□□□□ -1.2
SPT20YOL148C VHS2P40463 436 aa7.58□□□□□ -1.2
SPT20YOL148C CWP2P43497 92 aa7.58□□□□□ -1.2
SPT20YOL148C YLR194CQ05777 254 aa7.58□□□□□ -1.2
SPT20YOL148C YER085CP40058 173 aa7.57□□□□□ -1.2
SPT20YOL148C SKI6P46948 246 aaPredicted RBP7.57□□□□□ -1.2
SPT20YOL148C ABF2Q02486 183 aa7.57□□□□□ -1.2
SPT20YOL148C ENV10Q99382 181 aa7.57□□□□□ -1.2
SPT20YOL148C KTI12P34253 313 aaKnown RBP7.57□□□□□ -1.2
SPT20YOL148C DSE2P38844 325 aa7.57□□□□□ -1.2
SPT20YOL148C VTC1P40046 129 aaRIP-Chip data7.57□□□□□ -1.2not detected
SPT20YOL148C DUO1P53168 247 aaKnown RBP7.57□□□□□ -1.2
SPT20YOL148C COX12Q01519 83 aa7.57□□□□□ -1.2
SPT20YOL148C MRPL49P40858 161 aaPredicted RBP7.56□□□□□ -1.2
SPT20YOL148C YCH1P42937 148 aa7.56□□□□□ -1.2
SPT20YOL148C AIM11P87275 137 aa7.56□□□□□ -1.2
SPT20YOL148C NRG2P38082 220 aa7.55□□□□□ -1.2
SPT20YOL148C YFL051CP43552 160 aa7.55□□□□□ -1.2
SPT20YOL148C FCY1Q12178 158 aa7.55□□□□□ -1.2
SPT20YOL148C GLO1P50107 326 aa7.55□□□□□ -1.2
SPT20YOL148C Q0255P03881 472 aa7.54□□□□□ -1.2
SPT20YOL148C RPS8AP0CX39 200 aaKnown RBP7.54□□□□□ -1.2
SPT20YOL148C RPS8BP0CX40 200 aaKnown RBP7.54□□□□□ -1.2
SPT20YOL148C VMA11P32842 164 aa7.54□□□□□ -1.2
SPT20YOL148C YKR045CP36138 183 aa7.54□□□□□ -1.2
SPT20YOL148C YTH1Q06102 208 aaPredicted RBP7.54□□□□□ -1.2
SPT20YOL148C YDR119W-AQ2V2P9 66 aa7.54□□□□□ -1.2
SPT20YOL148C YOR008C-AQ3E7B9 74 aa7.54□□□□□ -1.2
SPT20YOL148C STF1P01098 86 aa7.53□□□□□ -1.2
SPT20YOL148C MIC12P38341 106 aa7.53□□□□□ -1.2
SPT20YOL148C YIL059CP40520 121 aa7.53□□□□□ -1.2
SPT20YOL148C YIA6P40556 373 aa7.53□□□□□ -1.2
SPT20YOL148C COF1Q03048 143 aaKnown RBP7.53□□□□□ -1.2
SPT20YOL148C YMR105W-AQ8TGS8 64 aa7.53□□□□□ -1.2
SPT20YOL148C URM1P40554 99 aaPredicted RBP7.52□□□□□ -1.2
SPT20YOL148C AIM34Q03673 198 aa7.52□□□□□ -1.2
SPT20YOL148C YOR029WQ12243 111 aa7.52□□□□□ -1.2
SPT20YOL148C MRPL23Q12487 163 aaPredicted RBP7.52□□□□□ -1.2
SPT20YOL148C GLE2P40066 365 aa7.52□□□□□ -1.21
SPT20YOL148C VPS55P47111 140 aa7.52□□□□□ -1.21
SPT20YOL148C YHR139C-AO13536 103 aa7.51□□□□□ -1.21
SPT20YOL148C LCB3P47013 409 aa7.5□□□□□ -1.21
SPT20YOL148C YJL027CP47063 138 aaPredicted RBP7.5□□□□□ -1.21
SPT20YOL148C CCW14O13547 238 aa7.5□□□□□ -1.21
SPT20YOL148C RPL39P04650 51 aa7.5□□□□□ -1.21
SPT20YOL148C MID2P36027 376 aa7.5□□□□□ -1.21
SPT20YOL148C YDR209CQ03480 137 aa7.5□□□□□ -1.21
SPT20YOL148C YCL021W-AQ96VH3 125 aa7.5□□□□□ -1.21
SPT20YOL148C YLR415CO13578 112 aa7.49□□□□□ -1.21
SPT20YOL148C YHL042WP38729 150 aa7.49□□□□□ -1.21
SPT20YOL148C YMR317WQ04893 1140 aa7.49□□□□□ -1.21
SPT20YOL148C PRM7Q12459 698 aa7.49□□□□□ -1.21
SPT20YOL148C YPR053CQ6Q5F3 151 aa7.49□□□□□ -1.21
SPT20YOL148C SEN1Q00416 2231 aaKnown RBP7.49□□□□□ -1.21
SPT20YOL148C KNH1P50112 268 aa7.48□□□□□ -1.21
SPT20YOL148C CAX4P53223 239 aa7.48□□□□□ -1.21
SPT20YOL148C VPS13Q07878 3144 aa7.48□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms