RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W LSM4P40070 187 aaKnown RBP2.38□□□□□ -2.03
CSM3YMR048W GPI2P46961 280 aa2.38□□□□□ -2.03
CSM3YMR048W ALG13P53178 202 aa2.38□□□□□ -2.03
CSM3YMR048W FCY1Q12178 158 aa2.38□□□□□ -2.03
CSM3YMR048W DAD1Q12248 94 aa2.38□□□□□ -2.03
CSM3YMR048W SMT3Q12306 101 aaKnown RBP2.38□□□□□ -2.03
CSM3YMR048W ATP14Q12349 124 aa2.38□□□□□ -2.03
CSM3YMR048W DCN1Q12395 269 aa2.38□□□□□ -2.03
CSM3YMR048W CMC2Q3E7A4 109 aa2.38□□□□□ -2.03
CSM3YMR048W BLM10P43583 2143 aa2.38□□□□□ -2.03
CSM3YMR048W FMP49A0A023PZB3 126 aa2.37□□□□□ -2.03
CSM3YMR048W TIR1P10863 254 aa2.37□□□□□ -2.03
CSM3YMR048W CNB1P25296 175 aa2.37□□□□□ -2.03
CSM3YMR048W RPL14AP36105 138 aaKnown RBP2.37□□□□□ -2.03
CSM3YMR048W RPL14BP38754 138 aaKnown RBP2.37□□□□□ -2.03
CSM3YMR048W PAU7P39545 55 aa2.37□□□□□ -2.03
CSM3YMR048W PAU5P43575 122 aa2.37□□□□□ -2.03
CSM3YMR048W RPA43P46669 326 aa2.37□□□□□ -2.03
CSM3YMR048W IMP2P46972 177 aa2.37□□□□□ -2.03
CSM3YMR048W DAD3P69850 94 aa2.37□□□□□ -2.03
CSM3YMR048W YMR007WQ03675 126 aa2.37□□□□□ -2.03
CSM3YMR048W FIT2Q08906 153 aa2.37□□□□□ -2.03
CSM3YMR048W YLR118CQ12354 227 aa2.37□□□□□ -2.03
CSM3YMR048W YNL146C-AQ3E7Z1 64 aa2.37□□□□□ -2.03
CSM3YMR048W YLR342W-AQ3E810 57 aa2.37□□□□□ -2.03
CSM3YMR048W YCR075W-AQ3E830 75 aa2.37□□□□□ -2.03
CSM3YMR048W YHR213WP0CI67 198 aa2.36□□□□□ -2.03
CSM3YMR048W SRP21P32342 167 aa2.36□□□□□ -2.03
CSM3YMR048W GTT1P40582 234 aa2.36□□□□□ -2.03
CSM3YMR048W YJL027CP47063 138 aaPredicted RBP2.36□□□□□ -2.03
CSM3YMR048W TDA4P47153 279 aa2.36□□□□□ -2.03
CSM3YMR048W OST3P48439 350 aa2.36□□□□□ -2.03
CSM3YMR048W DSK2P48510 373 aa2.36□□□□□ -2.03
CSM3YMR048W CGR1P53188 120 aa2.36□□□□□ -2.03
CSM3YMR048W YIP3P53633 176 aa2.36□□□□□ -2.03
CSM3YMR048W GIM5Q04493 163 aa2.36□□□□□ -2.03
CSM3YMR048W YMR253CQ04835 414 aa2.36□□□□□ -2.03
CSM3YMR048W MSA1Q08471 629 aa2.36□□□□□ -2.03
CSM3YMR048W TRA1P38811 3744 aa2.35□□□□□ -2.03
CSM3YMR048W YHR212W-AP0CX91 67 aa2.35□□□□□ -2.03
CSM3YMR048W RPB11P38902 120 aa2.35□□□□□ -2.03
CSM3YMR048W MRPL49P40858 161 aaPredicted RBP2.35□□□□□ -2.03
CSM3YMR048W YDR366CP87287 132 aa2.35□□□□□ -2.03
CSM3YMR048W ATG39Q06159 398 aa2.35□□□□□ -2.03
CSM3YMR048W CSM4Q08955 156 aa2.35□□□□□ -2.03
CSM3YMR048W CCW12Q12127 133 aa2.35□□□□□ -2.03
CSM3YMR048W RPS22BQ3E7Y3 130 aaKnown RBP2.35□□□□□ -2.03
CSM3YMR048W YBL112CQ3E7Y4 105 aa2.35□□□□□ -2.03
CSM3YMR048W HTL1Q9URQ5 78 aa2.35□□□□□ -2.03
CSM3YMR048W PAU19P0CE85 124 aa2.34□□□□□ -2.03
CSM3YMR048W PAU21P0CE86 164 aa2.34□□□□□ -2.03
CSM3YMR048W PAU22P0CE87 164 aa2.34□□□□□ -2.03
CSM3YMR048W RPL2AP0CX45 254 aaKnown RBP2.34□□□□□ -2.03
CSM3YMR048W RPL2BP0CX46 254 aaKnown RBP2.34□□□□□ -2.03
CSM3YMR048W MRS4P23500 304 aa2.34□□□□□ -2.03
CSM3YMR048W PAU3P25610 124 aa2.34□□□□□ -2.03
CSM3YMR048W CDC39P25655 2108 aaKnown RBP2.34□□□□□ -2.03
CSM3YMR048W QRI5P32344 111 aa2.34□□□□□ -2.03
CSM3YMR048W ATG8P38182 117 aaRIP-Chip data2.34□□□□□ -2.03not detected
CSM3YMR048W TEM1P38987 245 aa2.34□□□□□ -2.03
CSM3YMR048W YJL028WP47062 111 aa2.34□□□□□ -2.03
CSM3YMR048W DAD4P69851 72 aa2.34□□□□□ -2.03
CSM3YMR048W YDR274CP87283 123 aa2.34□□□□□ -2.03
CSM3YMR048W PRP8P33334 2413 aaKnown RBP2.33□□□□□ -2.04
CSM3YMR048W RPL27AP0C2H6 136 aaKnown RBP2.33□□□□□ -2.04
CSM3YMR048W LSM2P38203 95 aaKnown RBP2.33□□□□□ -2.04
CSM3YMR048W YAR1P46683 200 aa2.33□□□□□ -2.04
CSM3YMR048W YGR026WP53217 278 aa2.33□□□□□ -2.04
CSM3YMR048W MRPS8Q03799 155 aa2.33□□□□□ -2.04
CSM3YMR048W NAT3Q06504 195 aa2.33□□□□□ -2.04
CSM3YMR048W SEC16P48415 2195 aaKnown RBP2.32□□□□□ -2.04
CSM3YMR048W RPS11AP0CX47 156 aaKnown RBP2.32□□□□□ -2.04
CSM3YMR048W RPS11BP0CX48 156 aaKnown RBP2.32□□□□□ -2.04
CSM3YMR048W YGL010WP25338 174 aa2.32□□□□□ -2.04
CSM3YMR048W ECM33P38248 429 aaKnown RBP2.32□□□□□ -2.04
CSM3YMR048W VMA21P41806 77 aa2.32□□□□□ -2.04
CSM3YMR048W FIP1P45976 327 aa2.32□□□□□ -2.04
CSM3YMR048W DAN1P47178 298 aa2.32□□□□□ -2.04
CSM3YMR048W SNO1Q03144 224 aa2.32□□□□□ -2.04
CSM3YMR048W RAV2Q03956 351 aa2.32□□□□□ -2.04
CSM3YMR048W FCF1Q05498 189 aaPredicted RBP2.32□□□□□ -2.04
CSM3YMR048W YOL160WQ08321 113 aa2.32□□□□□ -2.04
CSM3YMR048W IRC23Q08416 157 aa2.32□□□□□ -2.04
CSM3YMR048W YBL008W-AQ3E821 79 aa2.32□□□□□ -2.04
CSM3YMR048W COA6Q3E846 104 aa2.32□□□□□ -2.04
CSM3YMR048W MEC1P38111 2368 aa2.31□□□□□ -2.04
CSM3YMR048W VAR1P02381 398 aa2.31□□□□□ -2.04
CSM3YMR048W MRPL31P14063 131 aaPredicted RBP2.31□□□□□ -2.04
CSM3YMR048W YHR022CP38763 256 aa2.31□□□□□ -2.04
CSM3YMR048W YHR140WP38842 239 aa2.31□□□□□ -2.04
CSM3YMR048W SRP14P38985 146 aa2.31□□□□□ -2.04
CSM3YMR048W SPI1P40092 148 aa2.31□□□□□ -2.04
CSM3YMR048W YFR035CP43608 114 aa2.31□□□□□ -2.04
CSM3YMR048W ERI1P62651 68 aaKnown RBP2.31□□□□□ -2.04
CSM3YMR048W COX12Q01519 83 aa2.31□□□□□ -2.04
CSM3YMR048W GRH1Q04410 372 aaKnown RBP2.31□□□□□ -2.04
CSM3YMR048W RDS3Q06835 107 aaPredicted RBP2.31□□□□□ -2.04
CSM3YMR048W VAM10Q08474 114 aa2.31□□□□□ -2.04
CSM3YMR048W YGR240C-AQ3E786 66 aa2.31□□□□□ -2.04
CSM3YMR048W YNR034W-AQ3E841 98 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 69.1 ms