RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W Q0255P03881 472 aa4.05□□□□□ -1.76
CDC4YFL009W GPI18P38211 433 aa4.05□□□□□ -1.76
CDC4YFL009W MRPL49P40858 161 aaPredicted RBP4.05□□□□□ -1.76
CDC4YFL009W YHP1Q04116 353 aa4.05□□□□□ -1.76
CDC4YFL009W FCF1Q05498 189 aaPredicted RBP4.05□□□□□ -1.76
CDC4YFL009W YDR029WQ12111 104 aa4.05□□□□□ -1.76
CDC4YFL009W YLR412C-AQ3E742 68 aa4.05□□□□□ -1.76
CDC4YFL009W BEM2P39960 2167 aaKnown RBP4.05□□□□□ -1.76
CDC4YFL009W FPR1P20081 114 aaKnown RBP4.05□□□□□ -1.76
CDC4YFL009W TOM40P23644 387 aaKnown RBP4.05□□□□□ -1.76
CDC4YFL009W GON7P46984 123 aa4.05□□□□□ -1.76
CDC4YFL009W UBC13P52490 153 aa4.05□□□□□ -1.76
CDC4YFL009W HST4P53688 370 aa4.05□□□□□ -1.76
CDC4YFL009W YMR103CQ04436 120 aa4.05□□□□□ -1.76
CDC4YFL009W SHH4Q06236 168 aa4.05□□□□□ -1.76
CDC4YFL009W YGL258W-AQ3E740 77 aa4.05□□□□□ -1.76
CDC4YFL009W ACC1Q00955 2233 aaKnown RBP4.04□□□□□ -1.76
CDC4YFL009W YCR006CP25350 157 aa4.04□□□□□ -1.76
CDC4YFL009W IMP1P28627 190 aa4.04□□□□□ -1.76
CDC4YFL009W ALG13P53178 202 aa4.04□□□□□ -1.76
CDC4YFL009W TOM7P53507 60 aa4.04□□□□□ -1.76
CDC4YFL009W COF1Q03048 143 aaKnown RBP4.04□□□□□ -1.76
CDC4YFL009W YMR254CQ04838 102 aa4.04□□□□□ -1.76
CDC4YFL009W NCE102Q12207 173 aaRIP-Chip data4.04□□□□□ -1.76not detected
CDC4YFL009W YPL038W-AQ3E7B4 63 aa4.04□□□□□ -1.76
CDC4YFL009W SEC16P48415 2195 aaKnown RBP4.04□□□□□ -1.76
CDC4YFL009W VPS63O13549 108 aa4.04□□□□□ -1.76
CDC4YFL009W PHO85P17157 305 aa4.04□□□□□ -1.76
CDC4YFL009W YFL015CP43578 164 aa4.04□□□□□ -1.76
CDC4YFL009W NIP7Q08962 181 aaKnown RBP4.04□□□□□ -1.76
CDC4YFL009W RPS16AP0CX51 143 aaKnown RBP4.03□□□□□ -1.76
CDC4YFL009W RPS16BP0CX52 143 aaKnown RBP4.03□□□□□ -1.76
CDC4YFL009W ROX3P25046 220 aa4.03□□□□□ -1.76
CDC4YFL009W LST8P41318 303 aa4.03□□□□□ -1.76
CDC4YFL009W OST1P41543 476 aaKnown RBP4.03□□□□□ -1.76
CDC4YFL009W HNT3Q08702 217 aa4.03□□□□□ -1.76
CDC4YFL009W FIT2Q08906 153 aa4.03□□□□□ -1.76
CDC4YFL009W POL2P21951 2222 aaKnown RBP4.03□□□□□ -1.76
CDC4YFL009W YHR140WP38842 239 aa4.03□□□□□ -1.77
CDC4YFL009W NCA3P46955 337 aa4.03□□□□□ -1.77
CDC4YFL009W TDA7P53882 636 aaPredicted RBP4.03□□□□□ -1.77
CDC4YFL009W MGR2Q02889 113 aa4.03□□□□□ -1.77
CDC4YFL009W YLR112WQ12130 139 aa4.03□□□□□ -1.77
CDC4YFL009W YBR126W-AQ8TGU7 68 aa4.03□□□□□ -1.77
CDC4YFL009W YCL021W-AQ96VH3 125 aa4.03□□□□□ -1.77
CDC4YFL009W BRR2P32639 2163 aaKnown RBP4.02□□□□□ -1.77
CDC4YFL009W YMR31P19955 123 aa4.02□□□□□ -1.77
CDC4YFL009W FIP1P45976 327 aa4.02□□□□□ -1.77
CDC4YFL009W KNH1P50112 268 aa4.02□□□□□ -1.77
CDC4YFL009W YGR164WP53291 111 aa4.02□□□□□ -1.77
CDC4YFL009W CYR1P08678 2026 aaKnown RBP4.02□□□□□ -1.77
CDC4YFL009W YHR139C-AO13536 103 aa4.01□□□□□ -1.77
CDC4YFL009W SGN1P40561 250 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
CDC4YFL009W CIS3P47001 227 aa4.01□□□□□ -1.77
CDC4YFL009W PIS1P06197 220 aaKnown RBP4.01□□□□□ -1.77
CDC4YFL009W SMP1P38128 452 aa4.01□□□□□ -1.77
CDC4YFL009W SVP26P38869 228 aa4.01□□□□□ -1.77
CDC4YFL009W PET8P38921 284 aa4.01□□□□□ -1.77
CDC4YFL009W MST27P53176 234 aa4.01□□□□□ -1.77
CDC4YFL009W YNR077CP53758 84 aa4.01□□□□□ -1.77
CDC4YFL009W IGO2Q9P305 131 aa4.01□□□□□ -1.77
CDC4YFL009W YKL070WP36087 169 aa4□□□□□ -1.77
CDC4YFL009W HSK3P69852 69 aa4□□□□□ -1.77
CDC4YFL009W GPI19Q04082 140 aa4□□□□□ -1.77
CDC4YFL009W RPS8AP0CX39 200 aaKnown RBP4□□□□□ -1.77
CDC4YFL009W RPS8BP0CX40 200 aaKnown RBP4□□□□□ -1.77
CDC4YFL009W RPL32P38061 130 aaKnown RBP4□□□□□ -1.77
CDC4YFL009W YHL018WP38744 120 aaPredicted RBP4□□□□□ -1.77
CDC4YFL009W MIX14Q04341 121 aa4□□□□□ -1.77
CDC4YFL009W LTP1P40347 161 aa3.99□□□□□ -1.77
CDC4YFL009W YIL029CP40538 142 aa3.99□□□□□ -1.77
CDC4YFL009W RPL2AP0CX45 254 aaKnown RBP3.99□□□□□ -1.77
CDC4YFL009W RPL2BP0CX46 254 aaKnown RBP3.99□□□□□ -1.77
CDC4YFL009W YCR050CP25630 102 aa3.99□□□□□ -1.77
CDC4YFL009W VPS55P47111 140 aa3.99□□□□□ -1.77
CDC4YFL009W YPL261CQ08976 102 aa3.99□□□□□ -1.77
CDC4YFL009W DAD1Q12248 94 aa3.99□□□□□ -1.77
CDC4YFL009W YDR381C-AQ3E6R5 114 aa3.99□□□□□ -1.77
CDC4YFL009W TRP1P00912 224 aa3.98□□□□□ -1.77
CDC4YFL009W PFY1P07274 126 aa3.98□□□□□ -1.77
CDC4YFL009W YKR032WP36127 104 aa3.98□□□□□ -1.77
CDC4YFL009W YEL067CP39978 195 aa3.98□□□□□ -1.77
CDC4YFL009W TOS6P48560 102 aa3.98□□□□□ -1.77
CDC4YFL009W GLO1P50107 326 aa3.98□□□□□ -1.77
CDC4YFL009W PCP1P53259 346 aa3.98□□□□□ -1.77
CDC4YFL009W YFR057WP43625 151 aa3.98□□□□□ -1.77
CDC4YFL009W DAD4P69851 72 aa3.98□□□□□ -1.77
CDC4YFL009W SDC1Q03323 175 aa3.98□□□□□ -1.77
CDC4YFL009W YMR317WQ04893 1140 aa3.98□□□□□ -1.77
CDC4YFL009W AQY1P0CD91 305 aa3.97□□□□□ -1.77
CDC4YFL009W YMR141CP40211 102 aa3.97□□□□□ -1.77
CDC4YFL009W YFL051CP43552 160 aa3.97□□□□□ -1.77
CDC4YFL009W TIM22Q12328 207 aa3.97□□□□□ -1.77
CDC4YFL009W FAS1P07149 2051 aaKnown RBP3.97□□□□□ -1.77
CDC4YFL009W REE1P40893 198 aa3.96□□□□□ -1.77
CDC4YFL009W PBI2P0CT04 75 aaKnown RBP3.96□□□□□ -1.78
CDC4YFL009W COA3Q3E7B2 85 aa3.96□□□□□ -1.78
CDC4YFL009W YHR214C-DP0CX93 97 aa3.95□□□□□ -1.78
CDC4YFL009W GLE2P40066 365 aa3.95□□□□□ -1.78
CDC4YFL009W SPI1P40092 148 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 96.1 ms