RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W FCF1Q05498 189 aaPredicted RBP3.13□□□□□ -1.91
CHD1YER164W YLR042CQ07990 161 aa3.13□□□□□ -1.91
CHD1YER164W YLR361C-AQ3E795 98 aa3.13□□□□□ -1.91
CHD1YER164W YBR056W-AI2HB52 66 aa3.13□□□□□ -1.91
CHD1YER164W MRPL31P14063 131 aaPredicted RBP3.13□□□□□ -1.91
CHD1YER164W YOX1P34161 385 aa3.13□□□□□ -1.91
CHD1YER164W FIT2Q08906 153 aa3.13□□□□□ -1.91
CHD1YER164W TSC3Q3E790 80 aa3.13□□□□□ -1.91
CHD1YER164W YMR31P19955 123 aa3.12□□□□□ -1.91
CHD1YER164W MTR2P34232 184 aaKnown RBP3.12□□□□□ -1.91
CHD1YER164W YLR194CQ05777 254 aa3.12□□□□□ -1.91
CHD1YER164W RPL18AP0CX49 186 aaKnown RBP3.12□□□□□ -1.91
CHD1YER164W RPL18BP0CX50 186 aaKnown RBP3.12□□□□□ -1.91
CHD1YER164W ERS1P17261 260 aa3.12□□□□□ -1.91
CHD1YER164W GPI19Q04082 140 aa3.12□□□□□ -1.91
CHD1YER164W YBL112CQ3E7Y4 105 aa3.12□□□□□ -1.91
CHD1YER164W RPL16BP26785 198 aaKnown RBP3.12□□□□□ -1.91
CHD1YER164W REC104P33323 182 aa3.12□□□□□ -1.91
CHD1YER164W YBR209WP38311 105 aa3.12□□□□□ -1.91
CHD1YER164W GRE1Q08969 168 aa3.12□□□□□ -1.91
CHD1YER164W YPS3Q12303 508 aa3.12□□□□□ -1.91
CHD1YER164W VMA3P25515 160 aa3.11□□□□□ -1.91
CHD1YER164W MBB1P39534 108 aa3.11□□□□□ -1.91
CHD1YER164W VPS55P47111 140 aa3.11□□□□□ -1.91
CHD1YER164W USV1Q12132 391 aa3.11□□□□□ -1.91
CHD1YER164W RPS26AP39938 119 aaKnown RBP3.11□□□□□ -1.91
CHD1YER164W RPS26BP39939 119 aaKnown RBP3.11□□□□□ -1.91
CHD1YER164W PRM5P40476 318 aa3.11□□□□□ -1.91
CHD1YER164W LCB3P47013 409 aa3.11□□□□□ -1.91
CHD1YER164W YIP3P53633 176 aa3.11□□□□□ -1.91
CHD1YER164W YPL080CQ02826 108 aa3.11□□□□□ -1.91
CHD1YER164W TIM22Q12328 207 aa3.11□□□□□ -1.91
CHD1YER164W GLE2P40066 365 aa3.11□□□□□ -1.91
CHD1YER164W EGT2P42835 1041 aa3.11□□□□□ -1.91
CHD1YER164W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
CHD1YER164W YDL009CQ12210 107 aa3.11□□□□□ -1.91
CHD1YER164W HEM13P11353 328 aaKnown RBP3.11□□□□□ -1.91
CHD1YER164W YCR025CP25352 136 aa3.11□□□□□ -1.91
CHD1YER164W YHL042WP38729 150 aa3.11□□□□□ -1.91
CHD1YER164W YFL051CP43552 160 aa3.11□□□□□ -1.91
CHD1YER164W FIP1P45976 327 aa3.11□□□□□ -1.91
CHD1YER164W YTH1Q06102 208 aaPredicted RBP3.11□□□□□ -1.91
CHD1YER164W PRM3Q08931 133 aa3.11□□□□□ -1.91
CHD1YER164W PPT2Q12036 173 aa3.11□□□□□ -1.91
CHD1YER164W MRPL23Q12487 163 aaPredicted RBP3.11□□□□□ -1.91
CHD1YER164W YKL023C-AQ2V2P3 75 aa3.11□□□□□ -1.91
CHD1YER164W CYC3P06182 269 aa3.1□□□□□ -1.91
CHD1YER164W MIG1P27705 504 aa3.1□□□□□ -1.91
CHD1YER164W MRPL39P36533 70 aa3.1□□□□□ -1.91
CHD1YER164W SKI6P46948 246 aaPredicted RBP3.1□□□□□ -1.91
CHD1YER164W YDL186WP48568 277 aa3.1□□□□□ -1.91
CHD1YER164W GLO1P50107 326 aa3.1□□□□□ -1.91
CHD1YER164W YIL014C-AQ02598 104 aa3.1□□□□□ -1.91
CHD1YER164W YOR032W-AQ8TGS1 66 aa3.1□□□□□ -1.91
CHD1YER164W YBR090CP38253 122 aa3.1□□□□□ -1.91
CHD1YER164W YHR022CP38763 256 aa3.1□□□□□ -1.91
CHD1YER164W YER076CP40049 302 aa3.1□□□□□ -1.91
CHD1YER164W HUR1P45820 110 aa3.1□□□□□ -1.91
CHD1YER164W RPL42AP0CX27 106 aaKnown RBP3.1□□□□□ -1.91
CHD1YER164W RPL42BP0CX28 106 aaKnown RBP3.1□□□□□ -1.91
CHD1YER164W FPR2P32472 135 aa3.1□□□□□ -1.91
CHD1YER164W KTI12P34253 313 aaKnown RBP3.1□□□□□ -1.91
CHD1YER164W YAR068WP39564 161 aa3.1□□□□□ -1.91
CHD1YER164W YLR296WQ05898 108 aa3.1□□□□□ -1.91
CHD1YER164W DGA1Q08650 418 aa3.1□□□□□ -1.91
CHD1YER164W YOR097CQ12274 175 aaPredicted RBP3.1□□□□□ -1.91
CHD1YER164W UTP20P35194 2493 aaKnown RBP3.09□□□□□ -1.91
CHD1YER164W AQY1P0CD91 305 aa3.09□□□□□ -1.91
CHD1YER164W GAR1P28007 205 aaKnown RBP3.09□□□□□ -1.91
CHD1YER164W YBR121C-AP0C5L4 52 aa3.09□□□□□ -1.91
CHD1YER164W SRP14P38985 146 aa3.09□□□□□ -1.91
CHD1YER164W YER084WP40057 128 aa3.09□□□□□ -1.91
CHD1YER164W SWT21P53873 357 aaPredicted RBP3.09□□□□□ -1.91
CHD1YER164W YBR255C-AQ3E776 120 aa3.09□□□□□ -1.91
CHD1YER164W ENV10Q99382 181 aa3.09□□□□□ -1.91
CHD1YER164W TRP1P00912 224 aa3.09□□□□□ -1.91
CHD1YER164W COX10P21592 462 aa3.09□□□□□ -1.91
CHD1YER164W VMA11P32842 164 aa3.09□□□□□ -1.91
CHD1YER164W PEX17P40155 199 aa3.09□□□□□ -1.91
CHD1YER164W AIM19P40502 157 aa3.09□□□□□ -1.91
CHD1YER164W SGN1P40561 250 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
CHD1YER164W MRPL49P40858 161 aaPredicted RBP3.09□□□□□ -1.91
CHD1YER164W YFL041W-AQ3E817 63 aa3.09□□□□□ -1.91
CHD1YER164W RPL28P02406 149 aaKnown RBP3.09□□□□□ -1.92
CHD1YER164W YDR042CQ03205 200 aa3.09□□□□□ -1.92
CHD1YER164W BET1P22804 142 aa3.08□□□□□ -1.92
CHD1YER164W RPL16AP26784 199 aaKnown RBP3.08□□□□□ -1.92
CHD1YER164W MID2P36027 376 aa3.08□□□□□ -1.92
CHD1YER164W YJL118WP47022 219 aa3.08□□□□□ -1.92
CHD1YER164W KTI11Q3E840 82 aa3.08□□□□□ -1.92
CHD1YER164W SIP18P50263 79 aa3.08□□□□□ -1.92
CHD1YER164W PCP1P53259 346 aa3.08□□□□□ -1.92
CHD1YER164W CSH1P38287 376 aa3.08□□□□□ -1.92
CHD1YER164W YHR139C-AO13536 103 aa3.07□□□□□ -1.92
CHD1YER164W YLR342W-AQ3E810 57 aa3.07□□□□□ -1.92
CHD1YER164W FZF1P32805 299 aa3.07□□□□□ -1.92
CHD1YER164W SNF11P38956 169 aa3.07□□□□□ -1.92
CHD1YER164W YFR057WP43625 151 aa3.07□□□□□ -1.92
CHD1YER164W YGL260WP53056 76 aa3.07□□□□□ -1.92
CHD1YER164W TIM10P87108 93 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 178.2 ms