RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeastyeast

Gene TFB3, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB3YDR460W YFR057WP43625 151 aa3.77□□□□□ -1.81
TFB3YDR460W SDS23P53172 527 aa3.77□□□□□ -1.81
TFB3YDR460W TRM112P53738 135 aaPredicted RBP3.77□□□□□ -1.81
TFB3YDR460W HRT1Q08273 121 aa3.77□□□□□ -1.81
TFB3YDR460W YPR108W-AQ3E7B3 70 aa3.77□□□□□ -1.81
TFB3YDR460W YCR050CP25630 102 aa3.76□□□□□ -1.81
TFB3YDR460W FZF1P32805 299 aa3.76□□□□□ -1.81
TFB3YDR460W SRX1P36077 127 aa3.76□□□□□ -1.81
TFB3YDR460W CSH1P38287 376 aa3.76□□□□□ -1.81
TFB3YDR460W YHR140WP38842 239 aa3.76□□□□□ -1.81
TFB3YDR460W AIM19P40502 157 aa3.76□□□□□ -1.81
TFB3YDR460W HST4P53688 370 aa3.76□□□□□ -1.81
TFB3YDR460W SWT21P53873 357 aaPredicted RBP3.76□□□□□ -1.81
TFB3YDR460W YLR042CQ07990 161 aa3.76□□□□□ -1.81
TFB3YDR460W RLM1Q12224 676 aa3.76□□□□□ -1.81
TFB3YDR460W EMC6Q12431 108 aa3.76□□□□□ -1.81
TFB3YDR460W HFA1P32874 2273 aa3.75□□□□□ -1.81
TFB3YDR460W YHR139C-AO13536 103 aa3.75□□□□□ -1.81
TFB3YDR460W RPL2AP0CX45 254 aaKnown RBP3.75□□□□□ -1.81
TFB3YDR460W RPL2BP0CX46 254 aaKnown RBP3.75□□□□□ -1.81
TFB3YDR460W TOM40P23644 387 aaKnown RBP3.75□□□□□ -1.81
TFB3YDR460W OM14P38325 134 aa3.75□□□□□ -1.81
TFB3YDR460W YNL200CP40165 246 aaKnown RBP3.75□□□□□ -1.81
TFB3YDR460W MST27P53176 234 aa3.75□□□□□ -1.81
TFB3YDR460W YGR050CP53231 118 aa3.75□□□□□ -1.81
TFB3YDR460W CSL4P53859 292 aaPredicted RBP3.75□□□□□ -1.81
TFB3YDR460W YDR209CQ03480 137 aa3.75□□□□□ -1.81
TFB3YDR460W YOR186WQ08560 144 aa3.75□□□□□ -1.81
TFB3YDR460W IGO2Q9P305 131 aa3.75□□□□□ -1.81
TFB3YDR460W MRS3P10566 314 aa3.74□□□□□ -1.81
TFB3YDR460W FPR1P20081 114 aaKnown RBP3.74□□□□□ -1.81
TFB3YDR460W RPL16BP26785 198 aaKnown RBP3.74□□□□□ -1.81
TFB3YDR460W IMP1P28627 190 aa3.74□□□□□ -1.81
TFB3YDR460W YIL014C-AQ02598 104 aa3.74□□□□□ -1.81
TFB3YDR460W YMR007WQ03675 126 aa3.74□□□□□ -1.81
TFB3YDR460W YPR064WQ12492 139 aa3.74□□□□□ -1.81
TFB3YDR460W YCL021W-AQ96VH3 125 aa3.74□□□□□ -1.81
TFB3YDR460W CCW14O13547 238 aa3.73□□□□□ -1.81
TFB3YDR460W RFA2P26754 273 aaKnown RBP3.73□□□□□ -1.81
TFB3YDR460W KTI12P34253 313 aaKnown RBP3.73□□□□□ -1.81
TFB3YDR460W RPL32P38061 130 aaKnown RBP3.73□□□□□ -1.81
TFB3YDR460W YSY6P38374 65 aa3.73□□□□□ -1.81
TFB3YDR460W ELO1P39540 310 aa3.73□□□□□ -1.81
TFB3YDR460W SFT1P43682 97 aa3.73□□□□□ -1.81
TFB3YDR460W UBC13P52490 153 aa3.73□□□□□ -1.81
TFB3YDR460W YMR320WQ04897 101 aa3.73□□□□□ -1.81
TFB3YDR460W TIM18Q08749 192 aa3.73□□□□□ -1.81
TFB3YDR460W COA3Q3E7B2 85 aa3.73□□□□□ -1.81
TFB3YDR460W YBL112CQ3E7Y4 105 aa3.73□□□□□ -1.81
TFB3YDR460W YBR056W-AI2HB52 66 aa3.72□□□□□ -1.81
TFB3YDR460W MRPL31P14063 131 aaPredicted RBP3.72□□□□□ -1.81
TFB3YDR460W UBC4P15731 148 aa3.72□□□□□ -1.81
TFB3YDR460W FMP46P36141 133 aaKnown RBP3.72□□□□□ -1.81
TFB3YDR460W LYS1P38998 373 aaRIP-Chip data3.72□□□□□ -1.81not detected
TFB3YDR460W RRT13P40042 185 aa3.72□□□□□ -1.81
TFB3YDR460W SGN1P40561 250 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
TFB3YDR460W YFL015CP43578 164 aa3.72□□□□□ -1.81
TFB3YDR460W NCA3P46955 337 aa3.72□□□□□ -1.81
TFB3YDR460W RHO5P53879 331 aaKnown RBP3.72□□□□□ -1.81
TFB3YDR460W HAL1Q01766 294 aa3.72□□□□□ -1.81
TFB3YDR460W MIM1Q08176 113 aa3.72□□□□□ -1.81
TFB3YDR460W YGL258W-AQ3E740 77 aa3.72□□□□□ -1.81
TFB3YDR460W BET1P22804 142 aa3.71□□□□□ -1.82
TFB3YDR460W YBR144CP34215 104 aa3.71□□□□□ -1.82
TFB3YDR460W CTR2P38865 189 aa3.71□□□□□ -1.82
TFB3YDR460W YIL163CP40448 117 aa3.71□□□□□ -1.82
TFB3YDR460W SIM1P40472 476 aa3.71□□□□□ -1.82
TFB3YDR460W VEL1P53058 206 aa3.71□□□□□ -1.82
TFB3YDR460W MCH4Q08268 501 aa3.71□□□□□ -1.82
TFB3YDR460W YDR381C-AQ3E6R5 114 aa3.71□□□□□ -1.82
TFB3YDR460W HUG1Q6Q5K6 68 aa3.71□□□□□ -1.82
TFB3YDR460W KSH1Q8TGJ3 72 aa3.71□□□□□ -1.82
TFB3YDR460W YER175W-AQ8TGU4 54 aa3.71□□□□□ -1.82
TFB3YDR460W YBR126W-AQ8TGU7 68 aa3.71□□□□□ -1.82
TFB3YDR460W SFT2P38166 215 aa3.7□□□□□ -1.82
TFB3YDR460W PEX22P39718 180 aa3.7□□□□□ -1.82
TFB3YDR460W LST8P41318 303 aa3.7□□□□□ -1.82
TFB3YDR460W TDA7P53882 636 aaPredicted RBP3.7□□□□□ -1.82
TFB3YDR460W MGR2Q02889 113 aa3.7□□□□□ -1.82
TFB3YDR460W MIX14Q04341 121 aa3.7□□□□□ -1.82
TFB3YDR460W YMR254CQ04838 102 aa3.7□□□□□ -1.82
TFB3YDR460W IRC19Q07843 230 aa3.7□□□□□ -1.82
TFB3YDR460W YMR316C-AI2HB70 103 aa3.69□□□□□ -1.82
TFB3YDR460W RPL30P14120 105 aaKnown RBP3.69□□□□□ -1.82
TFB3YDR460W ROX3P25046 220 aa3.69□□□□□ -1.82
TFB3YDR460W YFR054CP43622 192 aa3.69□□□□□ -1.82
TFB3YDR460W TOS6P48560 102 aa3.69□□□□□ -1.82
TFB3YDR460W PET191Q02772 108 aa3.69□□□□□ -1.82
TFB3YDR460W RRS1Q08746 203 aaKnown RBP3.69□□□□□ -1.82
TFB3YDR460W YIL046W-AQ3E7Z4 54 aa3.69□□□□□ -1.82
TFB3YDR460W TRA1P38811 3744 aa3.69□□□□□ -1.82
TFB3YDR460W RPL18AP0CX49 186 aaKnown RBP3.68□□□□□ -1.82
TFB3YDR460W RPL18BP0CX50 186 aaKnown RBP3.68□□□□□ -1.82
TFB3YDR460W LDB16P25587 256 aa3.68□□□□□ -1.82
TFB3YDR460W IES6P32617 166 aa3.68□□□□□ -1.82
TFB3YDR460W MBB1P39534 108 aa3.68□□□□□ -1.82
TFB3YDR460W PEX17P40155 199 aa3.68□□□□□ -1.82
TFB3YDR460W YFL051CP43552 160 aa3.68□□□□□ -1.82
TFB3YDR460W CIS3P47001 227 aa3.68□□□□□ -1.82
TFB3YDR460W YGR219WP53307 113 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms