RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 HOMER3Q9NSC5 361 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 COL1A2P08123 1366 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 STX1BP61266 288 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 SMAD3P84022 425 aaKnown RBP11.41□□□□□ -0.58
POLR2A-209ENST00000617998 CHMP1BQ7LBR1 199 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 KIAA0319LQ8IZA0 1049 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 SLC25A41Q8N5S1 370 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 RNF19AQ9NV58 838 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 EOMESO95936 686 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 EPHX1P07099 455 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 SETMARQ53H47 684 aaPredicted RBP11.41□□□□□ -0.58
POLR2A-209ENST00000617998 KCNT2Q6UVM3 1135 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 ARL8AQ96BM9 186 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 DNAJC1Q96KC8 554 aaKnown RBP11.41□□□□□ -0.58
POLR2A-209ENST00000617998 FGD4Q96M96 766 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 CASS4Q9NQ75 786 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 GJB4Q9NTQ9 266 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 RBAK-RBAKDNI3L0D1 243 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 CACNB4O00305 520 aaPredicted RBP11.41□□□□□ -0.58
POLR2A-209ENST00000617998 OPA1O60313 960 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 CDR2Q01850 454 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 GRIN3AQ8TCU5 1115 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 HHIPL1Q96JK4 782 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 SERPINB11Q96P15 392 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 PXDNLA1KZ92 1463 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 A0A1W2PQ27 194 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 A0A1W2PQ64 194 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 A0A1W2PQD8 194 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 PALMO75781 387 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 RNASEH2AO75792 299 aaKnown RBP11.41□□□□□ -0.58
POLR2A-209ENST00000617998 RHOBTB1O94844 696 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 CCR1P32246 355 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 EOGTQ5NDL2 527 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.41□□□□□ -0.58
POLR2A-209ENST00000617998 PTAR1Q7Z6K3 402 aaPredicted RBP11.41□□□□□ -0.58
POLR2A-209ENST00000617998 ASB7Q9H672 318 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 ECT2Q9H8V3 914 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 MARCH2Q9P0N8 246 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 CFAP97Q9P2B7 532 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 SAE1Q9UBE0 346 aaPredicted RBP11.41□□□□□ -0.58
POLR2A-209ENST00000617998 INPPL1O15357 1258 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 TM4SF4P48230 202 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 RGS4P49798 205 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 POM121L1PQ3SYA9 428 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 CCDC170Q8IYT3 715 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 CAMKK1Q8N5S9 505 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 IGDCC4Q8TDY8 1250 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 MAGOHBQ96A72 148 aaKnown RBP11.41□□□□□ -0.58
POLR2A-209ENST00000617998 RILPQ96NA2 401 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 PCMTD2Q9NV79 361 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 CHORDC1Q9UHD1 332 aaPredicted RBP11.41□□□□□ -0.58
POLR2A-209ENST00000617998 ADAM28Q9UKQ2 775 aa11.41□□□□□ -0.58
POLR2A-209ENST00000617998 ZRANB2O95218 330 aaKnown RBP eCLIP11.4□□□□□ -0.58
POLR2A-209ENST00000617998 TIMP1P01033 207 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 AARSP49588 968 aaKnown RBP eCLIP11.4□□□□□ -0.58
POLR2A-209ENST00000617998 HIST2H2ACQ16777 129 aaPredicted RBP11.4□□□□□ -0.58
POLR2A-209ENST00000617998 HIST2H2AA3Q6FI13 130 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 SYTL1Q8IYJ3 562 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 FAM129AQ9BZQ8 928 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 ZDHHC4Q9NPG8 344 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 ESPNB1AK53 854 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 RASGRP1O95267 797 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 PTPN3P26045 913 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 CSE1LP55060 971 aaKnown RBP11.4□□□□□ -0.58
POLR2A-209ENST00000617998 DUSP4Q13115 394 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 PSMD6Q15008 389 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 HLA-DQA1Q5Y7H0 255 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 ARMC2Q8NEN0 867 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 OR14C36Q8NHC7 312 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 RSPH1Q8WYR4 309 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 Q9Y3F1 56 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 HES2Q9Y543 173 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 CCDC195A0A1B0GUA6 201 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 C2orf81A6NN90 581 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 CA3P07451 260 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 CFHP08603 1231 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 SARSP49591 514 aaKnown RBP11.4□□□□□ -0.58
POLR2A-209ENST00000617998 SRSF11Q05519 484 aaKnown RBP11.4□□□□□ -0.58
POLR2A-209ENST00000617998 CDV3Q9UKY7 258 aaKnown RBP11.4□□□□□ -0.58
POLR2A-209ENST00000617998 VDRP11473 427 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 ORC1Q13415 861 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 Q4G0T1 1027 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 B3GALNT2Q8NCR0 500 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 TRIM58Q8NG06 486 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 PIGKQ92643 395 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 MKL1Q969V6 931 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 C2orf49Q9BVC5 232 aaPredicted RBP11.4□□□□□ -0.58
POLR2A-209ENST00000617998 NUP85Q9BW27 656 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 HEATR9A2RTY3 570 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 C2orf27AQ580R0 203 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 NUGGCQ68CJ6 796 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 KLHL35Q6PF15 583 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 LEMD2Q8NC56 503 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 ZBTB18Q99592 522 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 TMEM8AQ9HCN3 771 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 ARHGEF4Q9NR80 690 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 TMEM161AQ9NX61 479 aa11.4□□□□□ -0.58
POLR2A-209ENST00000617998 ATP9BO43861 1147 aa11.4□□□□□ -0.59
POLR2A-209ENST00000617998 MSH3P20585 1137 aa11.4□□□□□ -0.59
POLR2A-209ENST00000617998 SPDYE7PQ495Y7 208 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms