RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 FANCLQ9NW38 375 aa12.61□□□□□ -0.39
H3F3B-212ENST00000592643 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.61□□□□□ -0.39
H3F3B-212ENST00000592643 MAGEC2Q9UBF1 373 aaPredicted RBP12.61□□□□□ -0.39
H3F3B-212ENST00000592643 MRPS23Q9Y3D9 190 aaKnown RBP12.61□□□□□ -0.39
H3F3B-212ENST00000592643 ASB3Q9Y575 518 aa12.61□□□□□ -0.39
H3F3B-212ENST00000592643 SLC38A8A6NNN8 435 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 HHLA1C9JL84 531 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 FGFR1OPO95684 399 aaKnown RBP12.6□□□□□ -0.39
H3F3B-212ENST00000592643 SLC9A1P19634 815 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 PGFP49763 221 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 ZNF132P52740 706 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 KCNMA1Q12791 1236 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 PLD1Q13393 1074 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 MAPRE1Q15691 268 aaKnown RBP12.6□□□□□ -0.39
H3F3B-212ENST00000592643 PTPN21Q16825 1174 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 TCP11X2Q5H9J9 407 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 FAM78AQ5JUQ0 283 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 IER5LQ5T953 404 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 SASS6Q6UVJ0 657 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 VSTM1Q6UX27 236 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 C4orf50Q6ZRC1 276 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 PDZD4Q76G19 769 aaPredicted RBP12.6□□□□□ -0.39
H3F3B-212ENST00000592643 RRAGAQ7L523 313 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 SCN4BQ8IWT1 228 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 DHX40Q8IX18 779 aaKnown RBP12.6□□□□□ -0.39
H3F3B-212ENST00000592643 SPATA17Q96L03 361 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 C8orf48Q96LL4 319 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 HNRNPABQ99729 332 aaKnown RBP12.6□□□□□ -0.39
H3F3B-212ENST00000592643 NT5C1AQ9BXI3 368 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 CSNK1G1Q9HCP0 422 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 ASAH2Q9NR71 780 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 ANO10Q9NW15 660 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 DACH1Q9UI36 760 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 NUMBLQ9Y6R0 609 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 PTPRDP23468 1912 aa12.6□□□□□ -0.39
H3F3B-212ENST00000592643 KCNJ18B7U540 433 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 NARSO43776 548 aaKnown RBP12.59□□□□□ -0.39
H3F3B-212ENST00000592643 PON1P27169 355 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 GABRR2P28476 465 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 CYP4F8P98187 520 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 KCNJ12Q14500 433 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 KRT31Q15323 416 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 MAN2A1Q16706 1144 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 ANO6Q4KMQ2 910 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 VWA3BQ502W6 1294 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 WDR44Q5JSH3 913 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 PPP1R26Q5T8A7 1209 aaPredicted RBP12.59□□□□□ -0.39
H3F3B-212ENST00000592643 TANGO2Q6ICL3 276 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 IQCEQ6IPM2 695 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 TRIM65Q6PJ69 517 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 GPRIN1Q7Z2K8 1008 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 PLCD3Q8N3E9 789 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 SLC44A3Q8N4M1 653 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 SCAMP5Q8TAC9 235 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 RIN3Q8TB24 985 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 TFAP2BQ92481 460 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 ACSF2Q96CM8 615 aaPredicted RBP12.59□□□□□ -0.39
H3F3B-212ENST00000592643 TRMT2BQ96GJ1 504 aaKnown RBP12.59□□□□□ -0.39
H3F3B-212ENST00000592643 TMEM176AQ96HP8 235 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 TNIP3Q96KP6 325 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 ASB16Q96NS5 453 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 TUBGCP2Q9BSJ2 902 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 TTLL2Q9BWV7 592 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 SLC46A2Q9BY10 475 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 NDST4Q9H3R1 872 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 GDE1Q9NZC3 331 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 IL37Q9NZH6 218 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 GCNT4Q9P109 453 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 CNTN6Q9UQ52 1028 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 TECTAO75443 2155 aa12.59□□□□□ -0.39
H3F3B-212ENST00000592643 SYCE3A1L190 88 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 BECN2A8MW95 431 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 DCXO43602 365 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 GABBR2O75899 941 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 CLSTN1O94985 981 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 PRAMEF12O95522 483 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 ATP1A3P13637 1013 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 GRIK1P39086 918 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 MTIF2P46199 727 aaKnown RBP12.58□□□□□ -0.4
H3F3B-212ENST00000592643 RPL10AP62906 217 aaKnown RBP12.58□□□□□ -0.4
H3F3B-212ENST00000592643 ZXDAP98168 799 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 MYL5Q02045 173 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 GCNT1Q02742 428 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 CYP4A22Q5TCH4 519 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 CLEC20AQ6ZU45 233 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 ITIH5Q86UX2 942 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 CREBRFQ8IUR6 639 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 GPIHBP1Q8IV16 184 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 ELMOD1Q8N336 334 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 LEMD2Q8NC56 503 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 FAM200AQ8TCP9 573 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 CYFIP2Q96F07 1278 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 ASIC4Q96FT7 647 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 NT5C1BQ96P26 610 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 SLC22A12Q96S37 553 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 ACP6Q9NPH0 428 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 KRT82Q9NSB4 513 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 TAB2Q9NYJ8 693 aa12.58□□□□□ -0.4
H3F3B-212ENST00000592643 FAM92AA1XBS5 289 aa12.57□□□□□ -0.4
H3F3B-212ENST00000592643 GTPBP10A4D1E9 387 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms