RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 DDX1Q92499 740 aaKnown RBP17.35■□□□□ 0.37
RAB3D-202ENST00000589655 CD101Q93033 1021 aa17.35■□□□□ 0.37
RAB3D-202ENST00000589655 LINC00597Q9H2U6 94 aa17.35■□□□□ 0.37
RAB3D-202ENST00000589655 PCIF1Q9H4Z3 704 aa17.35■□□□□ 0.37
RAB3D-202ENST00000589655 CCDC39Q9UFE4 941 aa17.35■□□□□ 0.37
RAB3D-202ENST00000589655 ITGA11Q9UKX5 1188 aa17.35■□□□□ 0.37
RAB3D-202ENST00000589655 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.35■□□□□ 0.37
RAB3D-202ENST00000589655 PCDHGA5Q9Y5G8 931 aa17.35■□□□□ 0.37
RAB3D-202ENST00000589655 CEP295Q9C0D2 2601 aa17.35■□□□□ 0.37
RAB3D-202ENST00000589655 CHD6Q8TD26 2715 aa17.35■□□□□ 0.37
RAB3D-202ENST00000589655 ZFHX4Q86UP3 3567 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 TRAV19A0A0A6YYK7 116 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 CKMP06732 381 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 USP17L7P0C7H9 530 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 LMO2P25791 158 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 HELZP42694 1942 aaKnown RBP17.34■□□□□ 0.37
RAB3D-202ENST00000589655 RBP5P82980 135 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 DMC1Q14565 340 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 GAB4Q2WGN9 574 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 RRAGBQ5VZM2 374 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 SV2BQ7L1I2 683 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 SPATA2LQ8IUW3 424 aaPredicted RBP17.34■□□□□ 0.37
RAB3D-202ENST00000589655 SCN4BQ8IWT1 228 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 GLIS3Q8NEA6 775 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 TTC16Q8NEE8 873 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 OR5B17Q8NGF7 314 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 SPATA18Q8TC71 538 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 SH3RF2Q8TEC5 729 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 CACTINQ8WUQ7 758 aaKnown RBP17.34■□□□□ 0.37
RAB3D-202ENST00000589655 FUBP3Q96I24 572 aaKnown RBP eCLIP17.34■□□□□ 0.37
RAB3D-202ENST00000589655 CRTAC1Q9NQ79 661 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 CFAP47Q6ZTR5 3102 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 FRYQ5TBA9 3013 aa17.34■□□□□ 0.37
RAB3D-202ENST00000589655 PTPRDP23468 1912 aa17.33■□□□□ 0.37
RAB3D-202ENST00000589655 VPS37CA5D8V6 355 aaPredicted RBP17.33■□□□□ 0.36
RAB3D-202ENST00000589655 PRPF6O94906 941 aaKnown RBP17.33■□□□□ 0.36
RAB3D-202ENST00000589655 LDHAP00338 332 aaKnown RBP17.33■□□□□ 0.36
RAB3D-202ENST00000589655 KRT19P08727 400 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 IDEP14735 1019 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 TCF3P15923 654 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 MAGEA11P43364 429 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 LHX1P48742 406 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 USP46P62068 366 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 PSMC1P62191 440 aaKnown RBP17.33■□□□□ 0.36
RAB3D-202ENST00000589655 RESTQ13127 1097 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 ATP2A3Q93084 1043 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 LSM14BQ9BX40 385 aaKnown RBP17.33■□□□□ 0.36
RAB3D-202ENST00000589655 PANK2Q9BZ23 570 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 VPS45Q9NRW7 570 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 INTS13Q9NVM9 706 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 EBF1Q9UH73 591 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 NME7Q9Y5B8 376 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 PCDHB13Q9Y5F0 798 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 ABCA7Q8IZY2 2146 aa17.33■□□□□ 0.36
RAB3D-202ENST00000589655 APBB3O95704 486 aa17.32■□□□□ 0.36
RAB3D-202ENST00000589655 PCSK1P29120 753 aa17.32■□□□□ 0.36
RAB3D-202ENST00000589655 OPRD1P41143 372 aa17.32■□□□□ 0.36
RAB3D-202ENST00000589655 IFNAR2P48551 515 aa17.32■□□□□ 0.36
RAB3D-202ENST00000589655 CUL4AQ13619 759 aa17.32■□□□□ 0.36
RAB3D-202ENST00000589655 SYCP3Q8IZU3 236 aa17.32■□□□□ 0.36
RAB3D-202ENST00000589655 NOC3LQ8WTT2 800 aaKnown RBP17.32■□□□□ 0.36
RAB3D-202ENST00000589655 MYLPFQ96A32 169 aa17.32■□□□□ 0.36
RAB3D-202ENST00000589655 SYT15Q9BQS2 421 aa17.32■□□□□ 0.36
RAB3D-202ENST00000589655 PANK4Q9NVE7 773 aa17.32■□□□□ 0.36
RAB3D-202ENST00000589655 ANGPTL2Q9UKU9 493 aa17.32■□□□□ 0.36
RAB3D-202ENST00000589655 ARHGAP26Q9UNA1 814 aa17.32■□□□□ 0.36
RAB3D-202ENST00000589655 INVSQ9Y283 1065 aa17.32■□□□□ 0.36
RAB3D-202ENST00000589655 BCLAF3A2AJT9 711 aaKnown RBP17.31■□□□□ 0.36
RAB3D-202ENST00000589655 K7EQS6 105 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 KCNK5O95279 499 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 TMEM191BP0C7N4 346 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 CHRM1P11229 460 aaPredicted RBP17.31■□□□□ 0.36
RAB3D-202ENST00000589655 HDCP19113 662 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 HOXD13P35453 343 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 SHC2P98077 582 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 CEBPZQ03701 1054 aaKnown RBP17.31■□□□□ 0.36
RAB3D-202ENST00000589655 PSMD2Q13200 908 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 ALCAMQ13740 583 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 CBWD2Q8IUF1 395 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 GPD1LQ8N335 351 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 USP33Q8TEY7 942 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 HPS3Q969F9 1004 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 ACDQ96AP0 544 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 HPDLQ96IR7 371 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 CHAMP1Q96JM3 812 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 SPATA17Q96L03 361 aa17.31■□□□□ 0.36
RAB3D-202ENST00000589655 NUP205Q92621 2012 aa17.3■□□□□ 0.36
RAB3D-202ENST00000589655 BDNFP23560 247 aa17.3■□□□□ 0.36
RAB3D-202ENST00000589655 CREB5Q02930 508 aa17.3■□□□□ 0.36
RAB3D-202ENST00000589655 MESP2Q0VG99 397 aa17.3■□□□□ 0.36
RAB3D-202ENST00000589655 KCNB1Q14721 858 aa17.3■□□□□ 0.36
RAB3D-202ENST00000589655 RNF43Q68DV7 783 aa17.3■□□□□ 0.36
RAB3D-202ENST00000589655 DPH6Q7L8W6 267 aa17.3■□□□□ 0.36
RAB3D-202ENST00000589655 SFTPA1Q8IWL2 248 aa17.3■□□□□ 0.36
RAB3D-202ENST00000589655 RNF38Q9H0F5 515 aa17.3■□□□□ 0.36
RAB3D-202ENST00000589655 TMEM30AQ9NV96 361 aa17.3■□□□□ 0.36
RAB3D-202ENST00000589655 MAGEC2Q9UBF1 373 aaPredicted RBP17.3■□□□□ 0.36
RAB3D-202ENST00000589655 CDH9Q9ULB4 789 aa17.3■□□□□ 0.36
RAB3D-202ENST00000589655 PDGFRBP09619 1106 aa17.29■□□□□ 0.36
RAB3D-202ENST00000589655 HNRNPLP14866 589 aaKnown RBP eCLIP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms