RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	GABBR2	O75899	941 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	IL18RAP	O95256	599 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	BMP15	O95972	392 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	C4BPA	P04003	597 aa	Known RBP	4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CYP17A1	P05093	508 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	KRT18	P05783	430 aa	Known RBP	4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PDGFRB	P09619	1106 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ZDHHC11B	P0C7U3	371 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PRR29	P0C7W0	189 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	IDE	P14735	1019 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TCF3	P15923	654 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	GAP43	P17677	238 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	BCKDHB	P21953	392 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	WARS	P23381	471 aa	Known RBP	4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	BDNF	P23560	247 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CDC25C	P30307	473 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	MAGEA11	P43364	429 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SLC6A11	P48066	632 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TUFM	P49411	452 aa	Known RBP	4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CCR3	P51677	355 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CDH8	P55286	799 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	MYL6	P60660	151 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	FOXK2	Q01167	660 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CYP24A1	Q07973	514 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	BFSP1	Q12934	665 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	STK4	Q13043	487 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	MTF1	Q14872	753 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PSMD6	Q15008	389 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CSRP2	Q16527	193 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ITPRIPL2	Q3MIP1	535 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SV2C	Q496J9	727 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	EMC10	Q5UCC4	262 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	FOXD4L5	Q5VV16	416 aa	Predicted RBP	4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TDRD10	Q5VZ19	366 aa	Known RBP	4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	LAIR1	Q6GTX8	287 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ARMCX5	Q6P1M9	558 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	RHBDF2	Q6PJF5	856 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ZC3H14	Q6PJT7	736 aa	Known RBP	4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PRR23C	Q6ZRP0	262 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SV2B	Q7L1I2	683 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	GPRIN1	Q7Z2K8	1008 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	DGLUCY	Q7Z3D6	616 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	LONP2	Q86WA8	852 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	NT5DC4	Q86YG4	428 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	MIB1	Q86YT6	1006 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	C12orf56	Q8IXR9	622 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ADGRG2	Q8IZP9	1017 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	FUK	Q8N0W3	1084 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	GPD1L	Q8N335	351 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TOP6BL	Q8N6T0	577 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	KRI1	Q8N9T8	703 aa	Known RBP	4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SCAMP5	Q8TAC9	235 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SH3RF2	Q8TEC5	729 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	USP33	Q8TEY7	942 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	WHAMM	Q8TF30	809 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	C2orf15	Q8WU43	125 aa	Known RBP	4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ATRIP	Q8WXE1	791 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	E2F7	Q96AV8	911 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	HPDL	Q96IR7	371 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ZC3H10	Q96K80	434 aa	Known RBP	4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	HHIP	Q96QV1	700 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	KCNK16	Q96T55	309 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SMO	Q99835	787 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SYT15	Q9BQS2	421 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	FAM126A	Q9BYI3	521 aa	Predicted RBP	4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SLITRK6	Q9H5Y7	841 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SMYD3	Q9H7B4	428 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	C8orf33	Q9H7E9	229 aa	Predicted RBP	4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	MBD1	Q9UIS9	605 aa	Predicted RBP	4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ITGA11	Q9UKX5	1188 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	DSE	Q9UL01	958 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	HPSE	Q9Y251	543 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PCDHB5	Q9Y5E4	795 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PLXND1	Q9Y4D7	1925 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ASPM	Q8IZT6	3477 aa		4.77	□□□□□ -1.65
PPP4R1-209	ENST00000578329	DSP	P15924	2871 aa	Known RBP	4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329		A0A0A0MRY4	1105 aa		4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	LRRIQ3	A6PVS8	624 aa	Predicted RBP	4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PATE3	B3GLJ2	98 aa		4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329		F8VP50	259 aa		4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329		K7ELQ4	463 aa	Predicted RBP	4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	LEFTY2	O00292	366 aa		4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CDX4	O14627	284 aa	Predicted RBP	4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	GIPC1	O14908	333 aa		4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SPTLC2	O15270	562 aa		4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	XPOT	O43592	962 aa	Known RBP	4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PPP6R2	O75170	966 aa		4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TACC1	O75410	805 aa		4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	EPN2	O95208	641 aa		4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	STAU1	O95793	577 aa	Known RBP	4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TOP3B	O95985	862 aa	Known RBP	4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	RET	P07949	1114 aa		4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ADRB1	P08588	477 aa		4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CSH1	P0DML2	217 aa		4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CSH2	P0DML3	217 aa		4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PTPN1	P18031	435 aa	Known RBP	4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	RFX1	P22670	979 aa		4.76	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PAX3	P23760	479 aa		4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms