RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 CCDC130P13994 396 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 FERP16591 822 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 ANXA13P27216 316 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 LTBRP36941 435 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 GRIK1P39086 918 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 ZNF75DP51815 510 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 ZBED6P86452 979 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 ITIH3Q06033 890 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 VEPH1Q14D04 833 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 PTPN21Q16825 1174 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 CES5AQ6NT32 575 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 LCLAT1Q6UWP7 414 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 EP400NLQ6ZTU2 488 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 ITIH5Q86UX2 942 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 ZNF677Q86XU0 584 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 ANKRD52Q8NB46 1076 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 ZNF606Q8WXB4 792 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 HLA-CQ95604 372 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 SPATA17Q96L03 361 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 ZNF512Q96ME7 567 aaPredicted RBP11.1□□□□□ -0.63
LRRC28-204ENST00000558172 DUSP16Q9BY84 665 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 UBXN6Q9BZV1 441 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 ZNF518BQ9C0D4 1074 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 CRISPLD1Q9H336 500 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 UBE2ZQ9H832 354 aaPredicted RBP11.1□□□□□ -0.63
LRRC28-204ENST00000558172 CSNK1G1Q9HCP0 422 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 DMAP1Q9NPF5 467 aaPredicted RBP11.1□□□□□ -0.63
LRRC28-204ENST00000558172 EHD2Q9NZN4 543 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 CLEC1BQ9P126 229 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 TSPAN16Q9UKR8 245 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 CAPN11Q9UMQ6 739 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 LUC7L2Q9Y383 392 aaKnown RBP11.1□□□□□ -0.63
LRRC28-204ENST00000558172 YIPF1Q9Y548 306 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 NOTCH4Q99466 2003 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 O00370 1275 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 CLDN5O00501 218 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 THAP12O43422 761 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 TBX10O75333 385 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 RFPL2O75678 378 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 GFPT2O94808 682 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 CSH1P0DML2 217 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 CSH2P0DML3 217 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 NPR3P17342 541 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 PTPN2P17706 415 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 ADORA2BP29275 332 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 KRT9P35527 623 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 PDE6CP51160 858 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 RBM10P98175 930 aaKnown RBP11.09□□□□□ -0.63
LRRC28-204ENST00000558172 TWF1Q12792 350 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 CCDC142Q17RM4 750 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 SFMBT2Q5VUG0 894 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 SYCE2Q6PIF2 218 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 GPR149Q86SP6 731 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 SCN4BQ8IWT1 228 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 TFAP2BQ92481 460 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 BAP1Q92560 729 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 SYN2Q92777 582 aaPredicted RBP11.09□□□□□ -0.63
LRRC28-204ENST00000558172 MSLNLQ96KJ4 702 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 ADAM7Q9H2U9 754 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 PIDD1Q9HB75 910 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 PNPLA8Q9NP80 782 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 COMMD8Q9NX08 183 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 AIPL1Q9NZN9 384 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 PCDHGC3Q9UN70 934 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.09□□□□□ -0.63
LRRC28-204ENST00000558172 ANAPC1Q9H1A4 1944 aa11.09□□□□□ -0.63
LRRC28-204ENST00000558172 OBSL1O75147 1896 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 LRRC53A6NM62 1247 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 F8VP50 259 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 GYPCP04921 128 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 PNMA6AP0CW24 399 aaPredicted RBP11.08□□□□□ -0.64
LRRC28-204ENST00000558172 SETSIPP0DME0 302 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 CYP11B1P15538 503 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 ATF6P18850 670 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 BRD2P25440 801 aaKnown RBP11.08□□□□□ -0.64
LRRC28-204ENST00000558172 CDC25BP30305 580 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 CASP14P31944 242 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 BCAT1P54687 386 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 MAP3K7CLP57077 242 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 DLX2Q07687 328 aaPredicted RBP11.08□□□□□ -0.64
LRRC28-204ENST00000558172 BST2Q10589 180 aaKnown RBP11.08□□□□□ -0.64
LRRC28-204ENST00000558172 TAF12Q16514 161 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 DDR2Q16832 855 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 TSR1Q2NL82 804 aaKnown RBP11.08□□□□□ -0.64
LRRC28-204ENST00000558172 GOLGA7BQ2TAP0 167 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 ATAT1Q5SQI0 421 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 RARS2Q5T160 578 aaKnown RBP11.08□□□□□ -0.64
LRRC28-204ENST00000558172 CLEC20AQ6ZU45 233 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 SLC47A2Q86VL8 602 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 NUP93Q8N1F7 819 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 TTC9BQ8N6N2 239 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 LEMD2Q8NC56 503 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 CPLX3Q8WVH0 158 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 SMG7Q92540 1137 aaKnown RBP11.08□□□□□ -0.64
LRRC28-204ENST00000558172 PSMG2Q969U7 264 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 RIPOR3Q96MK2 946 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 SMOQ99835 787 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 S1PR5Q9H228 398 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 PDCL3Q9H2J4 239 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 GRPEL1Q9HAV7 217 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms