RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 HOXA6P31267 233 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 EIF1AXP47813 144 aaKnown RBP7.97□□□□□ -1.13
ATXN3-219ENST00000553488 SOX9P48436 509 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 LRRC32Q14392 662 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 SF3A2Q15428 464 aaKnown RBP7.97□□□□□ -1.13
ATXN3-219ENST00000553488 TEAD2Q15562 447 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 TPGS2Q68CL5 300 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 CPLX2Q6PUV4 134 aaKnown RBP7.97□□□□□ -1.13
ATXN3-219ENST00000553488 WDR5BQ86VZ2 330 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 TMC8Q8IU68 726 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 BEST2Q8NFU1 509 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 SHKBP1Q8TBC3 707 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 ZSCAN18Q8TBC5 510 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-219ENST00000553488 ZMAT2Q96NC0 199 aaKnown RBP7.97□□□□□ -1.13
ATXN3-219ENST00000553488 LRRC3Q9BY71 257 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 TM6SF1Q9BZW5 370 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 TMEM60Q9H2L4 133 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 CYP4F11Q9HBI6 524 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 FNDC3AQ9Y2H6 1198 aaKnown RBP7.97□□□□□ -1.13
ATXN3-219ENST00000553488 PCNX2A6NKB5 2137 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 TCHHQ07283 1943 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 HELZP42694 1942 aaKnown RBP7.96□□□□□ -1.13
ATXN3-219ENST00000553488 SLC38A8A6NNN8 435 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 SPECC1L-ADORA2AF8WAN1 911 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 FAM229AH3BQW9 127 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 ABLIM1O14639 778 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 ZNF263O14978 683 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 CHADO15335 359 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 NEMFO60524 1076 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 CDKL5O76039 1030 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 FDPSP14324 419 aaKnown RBP7.96□□□□□ -1.14
ATXN3-219ENST00000553488 KCNE1P15382 129 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 CYP11B2P19099 503 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 ATP2B1P20020 1258 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 ELF1P32519 619 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 KRT2P35908 639 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 TXKP42681 527 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 RAP1GAPP47736 663 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 TWF1Q12792 350 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 ECM1Q16610 540 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 AASDHQ4L235 1098 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-219ENST00000553488 DGKKQ5KSL6 1271 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 STXBP5Q5T5C0 1151 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 CYP4A22Q5TCH4 519 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 ATF7IP2Q5U623 682 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 HEATR6Q6AI08 1181 aaKnown RBP7.96□□□□□ -1.14
ATXN3-219ENST00000553488 PKN3Q6P5Z2 889 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 C1orf228Q6PIY5 440 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 CATSPER3Q86XQ3 398 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 LEMD2Q8NC56 503 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 DEPTORQ8TB45 409 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 LRRC3BQ96PB8 259 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 POLR3CQ9BUI4 534 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-219ENST00000553488 DNAJC25Q9H1X3 360 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 CDT1Q9H211 546 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 PTPRHQ9HD43 1115 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 TUFT1Q9NNX1 390 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 ASAH2Q9NR71 780 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 CNTN3Q9P232 1028 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 AFF4Q9UHB7 1163 aaKnown RBP7.96□□□□□ -1.14
ATXN3-219ENST00000553488 TNFSF13BQ9Y275 285 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 YIPF1Q9Y548 306 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 CYP46A1Q9Y6A2 500 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 THADAQ6YHU6 1953 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 GCN1Q92616 2671 aaKnown RBP7.96□□□□□ -1.14
ATXN3-219ENST00000553488 PHLPP2Q6ZVD8 1323 aa7.96□□□□□ -1.14
ATXN3-219ENST00000553488 ANAPC1Q9H1A4 1944 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 PLXND1Q9Y4D7 1925 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 GON4LQ3T8J9 2241 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 H7C4K7 107 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 J3QW42 95 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 EPB41L2O43491 1005 aaKnown RBP7.95□□□□□ -1.14
ATXN3-219ENST00000553488 PFKFB2O60825 505 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 REC8O95072 547 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 PDGFAP04085 211 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 PROS1P07225 676 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 ZNF806P0C7X5 589 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 MYL4P12829 197 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 XBP1P17861 261 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 LIG1P18858 919 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 PROZP22891 400 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 EFNA5P52803 228 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 ARPP19P56211 112 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 CCDC6Q16204 474 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 CTXN3Q4LDR2 81 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 PRRT3Q5FWE3 981 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 STPG1Q5TH74 334 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 IL31Q6EBC2 164 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 IQCEQ6IPM2 695 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 ZNF280DQ6N043 979 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 CENPQQ7L2Z9 268 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-219ENST00000553488 RALGPS2Q86X27 583 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-219ENST00000553488 ELMOD1Q8N336 334 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 TMEM130Q8N3G9 435 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 GAB3Q8WWW8 586 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 E2F7Q96AV8 911 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 C18orf25Q96B23 403 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-219ENST00000553488 CHFRQ96EP1 664 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 LOXL4Q96JB6 756 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 ARRDC1-AS1Q9H2J1 176 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms