RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 NEUROD6Q96NK8 337 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 MYADMQ96S97 322 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 ALG1Q9BT22 464 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 RPP25Q9BUL9 199 aaKnown RBP3.92□□□□□ -1.78
FOXN3-203ENST00000553353 FAM126AQ9BYI3 521 aaPredicted RBP3.92□□□□□ -1.78
FOXN3-203ENST00000553353 MEGF9Q9H1U4 602 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 TMX1Q9H3N1 280 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 DBNLQ9UJU6 430 aaKnown RBP3.92□□□□□ -1.78
FOXN3-203ENST00000553353 DDX41Q9UJV9 622 aaKnown RBP3.92□□□□□ -1.78
FOXN3-203ENST00000553353 RCAN3Q9UKA8 241 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 GMEB2Q9UKD1 530 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 ADAM29Q9UKF5 820 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 CROTQ9UKG9 612 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 ZDHHC9Q9Y397 364 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 MSRB2Q9Y3D2 182 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 RAI2Q9Y5P3 530 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 COL11A1P12107 1806 aaPredicted RBP3.92□□□□□ -1.78
FOXN3-203ENST00000553353 PARP14Q460N5 1801 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 DNHD1Q96M86 4753 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 RAD50Q92878 1312 aa3.92□□□□□ -1.78
FOXN3-203ENST00000553353 COL12A1Q99715 3063 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 H7BY64 318 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 PPFIA4O75335 1185 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 TADA3O75528 432 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 IDH1O75874 414 aaKnown RBP3.91□□□□□ -1.78
FOXN3-203ENST00000553353 GH1P01241 217 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 CHGBP05060 677 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 ICAM1P05362 532 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 ZNF806P0C7X5 589 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 SMIM10L2AP0DMW4 78 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 SMIM10L2BP0DMW5 78 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 GHRP10912 638 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 FPR2P25090 351 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 HOXC13P31276 330 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 RPS9P46781 194 aaKnown RBP3.91□□□□□ -1.78
FOXN3-203ENST00000553353 RPS6P62753 249 aaKnown RBP3.91□□□□□ -1.78
FOXN3-203ENST00000553353 FANCCQ00597 558 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 MTAPQ13126 283 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 KCNAB2Q13303 367 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 FOXE3Q13461 319 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 HTR4Q13639 388 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 WDR43Q15061 677 aaKnown RBP eCLIP3.91□□□□□ -1.78
FOXN3-203ENST00000553353 RALGAPA2Q2PPJ7 1873 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 PAN2Q504Q3 1202 aaKnown RBP3.91□□□□□ -1.78
FOXN3-203ENST00000553353 ZNF394Q53GI3 561 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 TNNI3KQ59H18 835 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 EMC4Q5J8M3 183 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 MIIPQ5JXC2 388 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 PLPP4Q5VZY2 271 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 GTF2IRD2BQ6EKJ0 949 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 KIAA1211LQ6NV74 962 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 CTR9Q6PD62 1173 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 TRMT10BQ6PF06 316 aaKnown RBP3.91□□□□□ -1.78
FOXN3-203ENST00000553353 DCLRE1AQ6PJP8 1040 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 VHLLQ6RSH7 139 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 PCSK4Q6UW60 755 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 NSMFQ6X4W1 530 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 CENPQQ7L2Z9 268 aaPredicted RBP3.91□□□□□ -1.78
FOXN3-203ENST00000553353 OTOP3Q7RTS5 596 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 GTF2IRD2Q86UP8 949 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 TRIM59Q8IWR1 403 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 FANCMQ8IYD8 2048 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 ZNF843Q8N446 348 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 COLGALT1Q8NBJ5 622 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 MICAL1Q8TDZ2 1067 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 STAG1Q8WVM7 1258 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 ATP6V0A1Q93050 837 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 PKNOX2Q96KN3 472 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 ZSWIM3Q96MP5 696 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 MEIS3Q99687 375 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 TCF25Q9BQ70 676 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 KATNAL1Q9BW62 490 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 RHOBTB2Q9BYZ6 727 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 LTB4R2Q9NPC1 389 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 TYW1Q9NV66 732 aaKnown RBP3.91□□□□□ -1.78
FOXN3-203ENST00000553353 TMEM260Q9NX78 707 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 MTMR4Q9NYA4 1195 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 COL20A1Q9P218 1284 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 C11orf21Q9P2W6 132 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 APEX2Q9UBZ4 518 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 ADD3Q9UEY8 706 aaKnown RBP3.91□□□□□ -1.78
FOXN3-203ENST00000553353 ING1Q9UK53 422 aaPredicted RBP3.91□□□□□ -1.78
FOXN3-203ENST00000553353 KLK13Q9UKR3 277 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 NEUROG3Q9Y4Z2 214 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 FPGT-TNNI3KV9GXZ4 949 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 CACNA1IQ9P0X4 2223 aa3.91□□□□□ -1.78
FOXN3-203ENST00000553353 MYH13Q9UKX3 1938 aa3.9□□□□□ -1.78
FOXN3-203ENST00000553353 TCRBV5S2A0A599 114 aa3.9□□□□□ -1.79
FOXN3-203ENST00000553353 TMEM232C9JQI7 657 aa3.9□□□□□ -1.79
FOXN3-203ENST00000553353 ARHGAP6O43182 974 aa3.9□□□□□ -1.79
FOXN3-203ENST00000553353 MGEA5O60502 916 aa3.9□□□□□ -1.79
FOXN3-203ENST00000553353 MAFKO60675 156 aa3.9□□□□□ -1.79
FOXN3-203ENST00000553353 LRG1P02750 347 aa3.9□□□□□ -1.79
FOXN3-203ENST00000553353 UBTFL1P0CB47 393 aaPredicted RBP3.9□□□□□ -1.79
FOXN3-203ENST00000553353 SRGAP2BP0DMP2 458 aa3.9□□□□□ -1.79
FOXN3-203ENST00000553353 PDE6AP16499 860 aa3.9□□□□□ -1.79
FOXN3-203ENST00000553353 PBX3P40426 434 aa3.9□□□□□ -1.79
FOXN3-203ENST00000553353 BCL6P41182 706 aa3.9□□□□□ -1.79
FOXN3-203ENST00000553353 NOVP48745 357 aa3.9□□□□□ -1.79
FOXN3-203ENST00000553353 GPC5P78333 572 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms