RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 BAP1Q92560 729 aa18.23■□□□□ 0.51
ITGA5-213ENST00000553071 SPATA17Q96L03 361 aa18.23■□□□□ 0.51
ITGA5-213ENST00000553071 ZNF512Q96ME7 567 aaPredicted RBP18.23■□□□□ 0.51
ITGA5-213ENST00000553071 PDCL3Q9H2J4 239 aa18.23■□□□□ 0.51
ITGA5-213ENST00000553071 CSNK1G1Q9HCP0 422 aa18.23■□□□□ 0.51
ITGA5-213ENST00000553071 PNPLA8Q9NP80 782 aa18.23■□□□□ 0.51
ITGA5-213ENST00000553071 ZNHIT6Q9NWK9 470 aaKnown RBP18.23■□□□□ 0.51
ITGA5-213ENST00000553071 AJAP1Q9UKB5 411 aaPredicted RBP18.23■□□□□ 0.51
ITGA5-213ENST00000553071 COG5Q9UP83 839 aa18.23■□□□□ 0.51
ITGA5-213ENST00000553071 SLC27A5Q9Y2P5 690 aa18.23■□□□□ 0.51
ITGA5-213ENST00000553071 COL4A4P53420 1690 aaPredicted RBP18.22■□□□□ 0.51
ITGA5-213ENST00000553071 O00370 1275 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 AP1G2O75843 785 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 PAPLNO95428 1278 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 SEC24AO95486 1093 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 ADCY5O95622 1261 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 SETSIPP0DME0 302 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 CSH1P0DML2 217 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 CSH2P0DML3 217 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 CCDC130P13994 396 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 CYP11B1P15538 503 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 NPR3P17342 541 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 ADORA2BP29275 332 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 BCAT1P54687 386 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 GSE1Q14687 1217 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 TAF12Q16514 161 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 ANKRD54Q6NXT1 300 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 EP400NLQ6ZTU2 488 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 PAQR9Q6ZVX9 377 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 TMC6Q7Z403 805 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 SCN4BQ8IWT1 228 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 LEMD2Q8NC56 503 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 OR8K1Q8NGG5 319 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 CPLX3Q8WVH0 158 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 PRKD2Q9BZL6 878 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 ZNF518BQ9C0D4 1074 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 COMMD8Q9NX08 183 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 IMPACTQ9P2X3 320 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 TSPAN16Q9UKR8 245 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 PCDHGC3Q9UN70 934 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.22■□□□□ 0.51
ITGA5-213ENST00000553071 YIPF1Q9Y548 306 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 TRANK1O15050 2925 aa18.22■□□□□ 0.51
ITGA5-213ENST00000553071 CCDC195A0A1B0GUA6 201 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 LRRC53A6NM62 1247 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 FGF19O95750 216 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 GYPCP04921 128 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 CASP14P31944 242 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 GTF2F1P35269 517 aaKnown RBP eCLIP18.21■□□□□ 0.513e-7■■■■■ 32.2
ITGA5-213ENST00000553071 BST2Q10589 180 aaKnown RBP18.21■□□□□ 0.51
ITGA5-213ENST00000553071 TWF1Q12792 350 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 CCDC85BQ15834 202 aaPredicted RBP18.21■□□□□ 0.51
ITGA5-213ENST00000553071 ASIC2Q16515 512 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 PTPN21Q16825 1174 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 SLC47A2Q86VL8 602 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 TFAP2BQ92481 460 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 HLA-CQ95604 372 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 NOX5Q96PH1 765 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 LHX5Q9H2C1 402 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 KRT82Q9NSB4 513 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 TSC2P49815 1807 aa18.21■□□□□ 0.51
ITGA5-213ENST00000553071 AKR1B15C9JRZ8 316 aaPredicted RBP18.2■□□□□ 0.5
ITGA5-213ENST00000553071 CLDN5O00501 218 aa18.2■□□□□ 0.5
ITGA5-213ENST00000553071 RTN3O95197 1032 aaPredicted RBP18.2■□□□□ 0.5
ITGA5-213ENST00000553071 VNN2O95498 520 aa18.2■□□□□ 0.5
ITGA5-213ENST00000553071 BRD2P25440 801 aaKnown RBP18.2■□□□□ 0.5
ITGA5-213ENST00000553071 GOLGA7BQ2TAP0 167 aa18.2■□□□□ 0.5
ITGA5-213ENST00000553071 ATAT1Q5SQI0 421 aa18.2■□□□□ 0.5
ITGA5-213ENST00000553071 PPP1R2P3Q6NXS1 205 aa18.2■□□□□ 0.5
ITGA5-213ENST00000553071 TRIM72Q6ZMU5 477 aa18.2■□□□□ 0.5
ITGA5-213ENST00000553071 VPS36Q86VN1 386 aa18.2■□□□□ 0.5
ITGA5-213ENST00000553071 STK32AQ8WU08 396 aa18.2■□□□□ 0.5
ITGA5-213ENST00000553071 LPIN3Q9BQK8 851 aa18.2■□□□□ 0.5
ITGA5-213ENST00000553071 ADAM7Q9H2U9 754 aa18.2■□□□□ 0.5
ITGA5-213ENST00000553071 PIDD1Q9HB75 910 aa18.2■□□□□ 0.5
ITGA5-213ENST00000553071 UXTQ9UBK9 157 aaPredicted RBP18.2■□□□□ 0.5
ITGA5-213ENST00000553071 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.19■□□□□ 0.5
ITGA5-213ENST00000553071 F8VP50 259 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 XPO1O14980 1071 aaKnown RBP18.19■□□□□ 0.5
ITGA5-213ENST00000553071 MICAL2O94851 1124 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 LSM8O95777 96 aaKnown RBP18.19■□□□□ 0.5
ITGA5-213ENST00000553071 GLP2RO95838 553 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 PTPN2P17706 415 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 HNRNPH3P31942 346 aaKnown RBP18.19■□□□□ 0.5
ITGA5-213ENST00000553071 PRKCIP41743 596 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 MAP3K7CLP57077 242 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 CDR2Q01850 454 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 ARID5AQ03989 594 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 KLHL30Q0D2K2 578 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 TBX2Q13207 712 aaPredicted RBP18.19■□□□□ 0.5
ITGA5-213ENST00000553071 DDR2Q16832 855 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 DENND5BQ6ZUT9 1274 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 IRF2BP2Q7Z5L9 587 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 NUP93Q8N1F7 819 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 TMEM35BQ8NCS4 154 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 VN1R2Q8NFZ6 395 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 MAFAQ8NHW3 353 aaPredicted RBP18.19■□□□□ 0.5
ITGA5-213ENST00000553071 EPS8L1Q8TE68 723 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 PPM1EQ8WY54 764 aa18.19■□□□□ 0.5
ITGA5-213ENST00000553071 PSMG2Q969U7 264 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms