RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 SRPRBQ9Y5M8 271 aaKnown RBP16.53■□□□□ 0.24
RAB5C-205ENST00000550013 ABCA7Q8IZY2 2146 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 PTPRJQ12913 1337 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 A0A087X0B3 334 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 GABRDO14764 452 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 DCLK1O15075 740 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 LDHAP00338 332 aaKnown RBP16.52■□□□□ 0.24
RAB5C-205ENST00000550013 MPLP40238 635 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 RBP5P82980 135 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 CEBPZQ03701 1054 aaKnown RBP16.52■□□□□ 0.24
RAB5C-205ENST00000550013 EML3Q32P44 896 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 CFAP221Q4G0U5 840 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 N4BP2L1Q5TBK1 243 aaPredicted RBP16.52■□□□□ 0.24
RAB5C-205ENST00000550013 TCEAL6Q6IPX3 200 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 TOP6BLQ8N6T0 577 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 SH3RF2Q8TEC5 729 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 DDX1Q92499 740 aaKnown RBP16.52■□□□□ 0.24
RAB5C-205ENST00000550013 CD101Q93033 1021 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 ATP2A3Q93084 1043 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 TCEAL3Q969E4 200 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 CHAMP1Q96JM3 812 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 ZC3H10Q96K80 434 aaKnown RBP16.52■□□□□ 0.24
RAB5C-205ENST00000550013 PANK2Q9BZ23 570 aa16.52■□□□□ 0.24
RAB5C-205ENST00000550013 DUSP15Q9H1R2 295 aaPredicted RBP16.52■□□□□ 0.24
RAB5C-205ENST00000550013 NUP205Q92621 2012 aa16.52■□□□□ 0.23
RAB5C-205ENST00000550013 FRMD3A2A2Y4 597 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 PRPF6O94906 941 aaKnown RBP16.51■□□□□ 0.23
RAB5C-205ENST00000550013 TMEM191BP0C7N4 346 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 PCSK1P29120 753 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 TXLNAP40222 546 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 LHX1P48742 406 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 PSMC1P62191 440 aaKnown RBP16.51■□□□□ 0.23
RAB5C-205ENST00000550013 PSMD2Q13200 908 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 DMC1Q14565 340 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 FBXO43Q4G163 708 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 FAM171BQ6P995 826 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 SYT13Q7L8C5 426 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 OR5B17Q8NGF7 314 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 SPATA18Q8TC71 538 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 KBTBD7Q8WVZ9 684 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 FUBP3Q96I24 572 aaKnown RBP eCLIP16.51■□□□□ 0.231e-6■■■□□ 14.6
RAB5C-205ENST00000550013 LINC00597Q9H2U6 94 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 PANK4Q9NVE7 773 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 PCDHGA5Q9Y5G8 931 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 FRYQ5TBA9 3013 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 CFAP47Q6ZTR5 3102 aa16.51■□□□□ 0.23
RAB5C-205ENST00000550013 CHD6Q8TD26 2715 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 THADAQ6YHU6 1953 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 ANTXRLA6NF34 631 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 APBB3O95704 486 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 LMO2P25791 158 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 STAT6P42226 847 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 MAGEA11P43364 429 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 RESTQ13127 1097 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 ALCAMQ13740 583 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 KCNB1Q14721 858 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 GPD1LQ8N335 351 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 GLIS3Q8NEA6 775 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 MYLPFQ96A32 169 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 SYT15Q9BQS2 421 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 CRTAC1Q9NQ79 661 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 VPS45Q9NRW7 570 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 INTS13Q9NVM9 706 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 INVSQ9Y283 1065 aa16.5■□□□□ 0.23
RAB5C-205ENST00000550013 MYOFQ9NZM1 2061 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 HDCP19113 662 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 BDNFP23560 247 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 PMLP29590 882 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 USP46P62068 366 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 ZXDBP98169 803 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 CUL4AQ13619 759 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 CCDC73Q6ZRK6 1079 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 LIMS2Q7Z4I7 341 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 CBWD2Q8IUF1 395 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 FSIP1Q8NA03 581 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 HPS3Q969F9 1004 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 EXOC4Q96A65 974 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 ACDQ96AP0 544 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 HPDLQ96IR7 371 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 ANKRD36BP1Q96IX9 119 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 UPF2Q9HAU5 1272 aaKnown RBP16.49■□□□□ 0.23
RAB5C-205ENST00000550013 MAGEC2Q9UBF1 373 aaPredicted RBP16.49■□□□□ 0.23
RAB5C-205ENST00000550013 ANGPTL2Q9UKU9 493 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 ARHGAP26Q9UNA1 814 aa16.49■□□□□ 0.23
RAB5C-205ENST00000550013 PDGFRBP09619 1106 aa16.48■□□□□ 0.23
RAB5C-205ENST00000550013 TCF3P15923 654 aa16.48■□□□□ 0.23
RAB5C-205ENST00000550013 OPRD1P41143 372 aa16.48■□□□□ 0.23
RAB5C-205ENST00000550013 DGKEP52429 567 aa16.48■□□□□ 0.23
RAB5C-205ENST00000550013 SEC13P55735 322 aa16.48■□□□□ 0.23
RAB5C-205ENST00000550013 CREB5Q02930 508 aa16.48■□□□□ 0.23
RAB5C-205ENST00000550013 MYO1EQ12965 1108 aa16.48■□□□□ 0.23
RAB5C-205ENST00000550013 ELF2Q15723 593 aa16.48■□□□□ 0.23
RAB5C-205ENST00000550013 RNF43Q68DV7 783 aa16.48■□□□□ 0.23
RAB5C-205ENST00000550013 C4orf50Q6ZRC1 276 aa16.48■□□□□ 0.23
RAB5C-205ENST00000550013 SPATA17Q96L03 361 aa16.48■□□□□ 0.23
RAB5C-205ENST00000550013 TPSD1Q9BZJ3 242 aa16.48■□□□□ 0.23
RAB5C-205ENST00000550013 EBF1Q9UH73 591 aa16.48■□□□□ 0.23
RAB5C-205ENST00000550013 CDH9Q9ULB4 789 aa16.48■□□□□ 0.23
RAB5C-205ENST00000550013 R3HCC1Q9Y3T6 440 aaKnown RBP16.48■□□□□ 0.23
RAB5C-205ENST00000550013 RHOBTB1O94844 696 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms