RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 PDXKO00764 312 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 C4BPAP04003 597 aaKnown RBP20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 CHRNB1P11230 501 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 CTHP32929 405 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 MLLT6P55198 1093 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 PLCB2Q00722 1185 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 DPYDQ12882 1025 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 ZNF699Q32M78 642 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 ZNF528Q3MIS6 628 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 VSTM1Q6UX27 236 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 TTC16Q8NEE8 873 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 RIN3Q8TB24 985 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 CCDC47Q96A33 483 aaKnown RBP20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 MSANTD3Q96H12 275 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 SEMA4AQ9H3S1 761 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 GKN1Q9NS71 199 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 RBM12Q9NTZ6 932 aaKnown RBP20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 TDP1Q9NUW8 608 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 MAPK8IP1Q9UQF2 711 aa20.35■□□□□ 0.85
TNFRSF1A-212ENST00000539372 A8MXQ7 604 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 RHOBTB3O94955 611 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 ZNF202O95125 648 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 STAU1O95793 577 aaKnown RBP20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 PTPN1P18031 435 aaKnown RBP20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 ANXA13P27216 316 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 RAP1GAPP47736 663 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 AP3M2P53677 418 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 CDH8P55286 799 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 CLDN10P78369 228 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 NCOA4Q13772 614 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 PON2Q15165 354 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 WDR44Q5JSH3 913 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 TRIM68Q6AZZ1 485 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 SCARA5Q6ZMJ2 495 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 RALGPS2Q86X27 583 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 SPATA17Q96L03 361 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 SLC22A12Q96S37 553 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 CYP2S1Q96SQ9 504 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 PRMT8Q9NR22 394 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 OBSL1O75147 1896 aa20.34■□□□□ 0.85
TNFRSF1A-212ENST00000539372 DENND4CQ5VZ89 1909 aa20.33■□□□□ 0.85
TNFRSF1A-212ENST00000539372 CALUO43852 315 aaPredicted RBP20.33■□□□□ 0.85
TNFRSF1A-212ENST00000539372 VNN1O95497 513 aa20.33■□□□□ 0.85
TNFRSF1A-212ENST00000539372 FAM163BP0C2L3 166 aa20.33■□□□□ 0.85
TNFRSF1A-212ENST00000539372 USP46P62068 366 aa20.33■□□□□ 0.85
TNFRSF1A-212ENST00000539372 ITPRIPL2Q3MIP1 535 aa20.33■□□□□ 0.85
TNFRSF1A-212ENST00000539372 ZNF667Q5HYK9 610 aa20.33■□□□□ 0.85
TNFRSF1A-212ENST00000539372 C1orf228Q6PIY5 440 aa20.33■□□□□ 0.85
TNFRSF1A-212ENST00000539372 TMEM174Q8WUU8 243 aa20.33■□□□□ 0.85
TNFRSF1A-212ENST00000539372 FAM83CQ9BQN1 747 aa20.33■□□□□ 0.85
TNFRSF1A-212ENST00000539372 ZNF518BQ9C0D4 1074 aa20.33■□□□□ 0.85
TNFRSF1A-212ENST00000539372 EBF3Q9H4W6 596 aa20.33■□□□□ 0.85
TNFRSF1A-212ENST00000539372 KIF9Q9HAQ2 790 aa20.33■□□□□ 0.85
TNFRSF1A-212ENST00000539372 FRMD4BQ9Y2L6 1034 aa20.33■□□□□ 0.85
TNFRSF1A-212ENST00000539372 TRAV19A0A0A6YYK7 116 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 C2orf78A6NCI8 922 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 SOBPA7XYQ1 873 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 F8VP50 259 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 CLDN5O00501 218 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 TRIM66O15016 1216 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 KINO60870 393 aaKnown RBP20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 ARSAP15289 507 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 CACNA2D1P54289 1103 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 GAS6Q14393 721 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 BECN1Q14457 450 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 ZNF268Q14587 947 aaPredicted RBP20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 CC2D1AQ6P1N0 951 aaPredicted RBP20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 DENND5BQ6ZUT9 1274 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 ARL14EPQ8N8R7 260 aaPredicted RBP20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 B3GALNT2Q8NCR0 500 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 ATRIPQ8WXE1 791 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 B3GNT5Q9BYG0 378 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 VRTNQ9H8Y1 702 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 HPS4Q9NQG7 708 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 ZSCAN32Q9NX65 697 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 TRAF3IP3Q9Y228 551 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 PTPRZ1P23471 2315 aaPredicted RBP20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 RIF1Q5UIP0 2472 aaKnown RBP20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 CFAP54Q96N23 3096 aa20.32■□□□□ 0.84
TNFRSF1A-212ENST00000539372 OTOL1A6NHN0 477 aaPredicted RBP20.31■□□□□ 0.84
TNFRSF1A-212ENST00000539372 KIF20AO95235 890 aa20.31■□□□□ 0.84
TNFRSF1A-212ENST00000539372 CKMP06732 381 aa20.31■□□□□ 0.84
TNFRSF1A-212ENST00000539372 USP17L7P0C7H9 530 aa20.31■□□□□ 0.84
TNFRSF1A-212ENST00000539372 SATB1Q01826 763 aa20.31■□□□□ 0.84
TNFRSF1A-212ENST00000539372 RUNX3Q13761 415 aa20.31■□□□□ 0.84
TNFRSF1A-212ENST00000539372 LRRC32Q14392 662 aa20.31■□□□□ 0.84
TNFRSF1A-212ENST00000539372 Q6ZS52 159 aa20.31■□□□□ 0.84
TNFRSF1A-212ENST00000539372 TMC2Q8TDI7 906 aa20.31■□□□□ 0.84
TNFRSF1A-212ENST00000539372 SDCBP2Q9H190 292 aa20.31■□□□□ 0.84
TNFRSF1A-212ENST00000539372 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.31■□□□□ 0.843e-10■■■■■ 130.4
TNFRSF1A-212ENST00000539372 TMEM30AQ9NV96 361 aa20.31■□□□□ 0.84
TNFRSF1A-212ENST00000539372 GCNT4Q9P109 453 aa20.31■□□□□ 0.84
TNFRSF1A-212ENST00000539372 PCDHGA2Q9Y5H1 932 aa20.31■□□□□ 0.84
TNFRSF1A-212ENST00000539372 NR2F2P24468 414 aa20.3■□□□□ 0.84
TNFRSF1A-212ENST00000539372 FAM160A1Q05DH4 1040 aa20.3■□□□□ 0.84
TNFRSF1A-212ENST00000539372 KCNB1Q14721 858 aa20.3■□□□□ 0.84
TNFRSF1A-212ENST00000539372 MTF1Q14872 753 aa20.3■□□□□ 0.84
TNFRSF1A-212ENST00000539372 ZACNQ401N2 412 aa20.3■□□□□ 0.84
TNFRSF1A-212ENST00000539372 C1orf220Q5T0J3 134 aa20.3■□□□□ 0.84
TNFRSF1A-212ENST00000539372 SV2AQ7L0J3 742 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms