RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 WDCPQ9H6R7 721 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 ZWILCHQ9H900 591 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 SMURF2Q9HAU4 748 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 ARGLU1Q9NWB6 273 aaPredicted RBP4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 TMCC3Q9ULS5 477 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 PCDHGB4Q9UN71 923 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 PCDHB6Q9Y5E3 794 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 HS3ST4Q9Y661 456 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 SOS1Q07889 1333 aaPredicted RBP4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 A0A087WZ62 844 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 hCG_1807616A0A1W2PRN6 198 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 ZNF623O75123 536 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 GJB3O75712 270 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 ACTL6BO94805 426 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 BAG2O95816 211 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 SCGB1D1O95968 90 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 IGHDP01880 384 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 AHSGP02765 367 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 CYP1A1P04798 512 aaPredicted RBP4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 IDEP14735 1019 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 TNNT3P45378 269 aaPredicted RBP4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 SLC6A9P48067 706 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 GPR15P49685 360 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 CCT4P50991 539 aaKnown RBP4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 INHBCP55103 352 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 SOX8P57073 446 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 TLE1Q04724 770 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 FOXE3Q13461 319 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 NOLC1Q14978 699 aaKnown RBP eCLIP4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 WTAPQ15007 396 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 R3HDM1Q15032 1099 aaKnown RBP4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 CSRP2Q16527 193 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 MAN2A1Q16706 1144 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 CR1LQ2VPA4 569 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 CD276Q5ZPR3 534 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 ARL6IP4Q66PJ3 421 aaKnown RBP4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 NFRKBQ6P4R8 1299 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 TEPPQ6URK8 271 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 CD300LDQ6UXZ3 194 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 ZNF783Q6ZMS7 281 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 USP49Q70CQ1 688 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 IQCA1Q86XH1 822 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 VGLL2Q8N8G2 317 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 CEP70Q8NHQ1 597 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 SCAMP5Q8TAC9 235 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 IFI44Q8TCB0 444 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 CSGALNACT1Q8TDX6 532 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 CCDC47Q96A33 483 aaKnown RBP4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 ZG16BQ96DA0 208 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 CCDC34Q96HJ3 373 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 TMX3Q96JJ7 454 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 YME1L1Q96TA2 773 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 GORASP1Q9BQQ3 440 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 FDXACB1Q9BRP7 624 aaPredicted RBP4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 DESI2Q9BSY9 194 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 C11orf84Q9BUA3 381 aaPredicted RBP4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 MXD3Q9BW11 206 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 OSBPL6Q9BZF3 934 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 PITHD1Q9GZP4 211 aaPredicted RBP4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 IKZF4Q9H2S9 585 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 INCENPQ9NQS7 918 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 PRDM8Q9NQV8 689 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 ABCF3Q9NUQ8 709 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 TBC1D23Q9NUY8 699 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 BTBD7Q9P203 1132 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 RBPJLQ9UBG7 517 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 LPAR3Q9UBY5 353 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 ZNF212Q9UDV6 495 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 TBX20Q9UMR3 447 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 MTO1Q9Y2Z2 717 aaKnown RBP4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 SNX8Q9Y5X2 465 aa4.26□□□□□ -1.73
CLNS1A-208ENST00000527265 A0A087X1B8 175 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 NT5C1B-RDH14C9J2C7 533 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 H0Y3Z8 333 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 BTN3A1O00481 513 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 AP3D1O14617 1153 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 CLGNO14967 610 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 B4GALT3O60512 393 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 ACADMP11310 421 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 NPPBP16860 134 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 ABCD3P28288 659 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 AARSP49588 968 aaKnown RBP eCLIP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 POLE2P56282 527 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 SESN2P58004 480 aaPredicted RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 AP2B1P63010 937 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 NKX3-2P78367 333 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 IFI35P80217 286 aaPredicted RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 CALD1Q05682 793 aaKnown RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 SLC13A2Q13183 592 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 ACVR2BQ13705 512 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 DCTN1Q14203 1278 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 EIF4A2Q14240 407 aaKnown RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 RAB39AQ14964 217 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 PKN2Q16513 984 aaKnown RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 ASIC2Q16515 512 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 CTXN3Q4LDR2 81 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 FLYWCH1Q4VC44 716 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 CCDC178Q5BJE1 867 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms