RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 PCIF1Q9H4Z3 704 aa25.69■■□□□ 1.7
USP47-205ENST00000525257 SIX4Q9UIU6 781 aa25.69■■□□□ 1.7
USP47-205ENST00000525257 PCDHB13Q9Y5F0 798 aa25.69■■□□□ 1.7
USP47-205ENST00000525257 CEP295Q9C0D2 2601 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 C2orf78A6NCI8 922 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 DCLK1O15075 740 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 TMEM191BP0C7N4 346 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 PCSK1P29120 753 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 TXLNAP40222 546 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 LHX1P48742 406 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 RBP5P82980 135 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 DMC1Q14565 340 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 EML3Q32P44 896 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 CFAP221Q4G0U5 840 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 LMBRD2Q68DH5 695 aaPredicted RBP25.68■■□□□ 1.7
USP47-205ENST00000525257 TCEAL6Q6IPX3 200 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 SYT13Q7L8C5 426 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 TOP6BLQ8N6T0 577 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 SH3RF2Q8TEC5 729 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 TCEAL3Q969E4 200 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 DUSP15Q9H1R2 295 aaPredicted RBP25.68■■□□□ 1.7
USP47-205ENST00000525257 OLFML3Q9NRN5 406 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 VPS45Q9NRW7 570 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 ANGPTL2Q9UKU9 493 aa25.68■■□□□ 1.7
USP47-205ENST00000525257 HELZP42694 1942 aaKnown RBP25.68■■□□□ 1.7
USP47-205ENST00000525257 APBB3O95704 486 aa25.67■■□□□ 1.7
USP47-205ENST00000525257 KCNB1Q14721 858 aa25.67■■□□□ 1.7
USP47-205ENST00000525257 ELF2Q15723 593 aa25.67■■□□□ 1.7
USP47-205ENST00000525257 SOWAHAQ2M3V2 549 aa25.67■■□□□ 1.7
USP47-205ENST00000525257 FSIP1Q8NA03 581 aa25.67■■□□□ 1.7
USP47-205ENST00000525257 SPATA18Q8TC71 538 aa25.67■■□□□ 1.7
USP47-205ENST00000525257 ACDQ96AP0 544 aa25.67■■□□□ 1.7
USP47-205ENST00000525257 FUBP3Q96I24 572 aaKnown RBP eCLIP25.67■■□□□ 1.7
USP47-205ENST00000525257 GCNT4Q9P109 453 aa25.67■■□□□ 1.7
USP47-205ENST00000525257 SRPRBQ9Y5M8 271 aaKnown RBP25.67■■□□□ 1.7
USP47-205ENST00000525257 GABRDO14764 452 aa25.66■■□□□ 1.7
USP47-205ENST00000525257 ATP2C2O75185 946 aa25.66■■□□□ 1.7
USP47-205ENST00000525257 PMLP29590 882 aa25.66■■□□□ 1.7
USP47-205ENST00000525257 PSMC1P62191 440 aaKnown RBP25.66■■□□□ 1.7
USP47-205ENST00000525257 PRPF6O94906 941 aaKnown RBP25.65■■□□□ 1.7
USP47-205ENST00000525257 CREB5Q02930 508 aa25.65■■□□□ 1.7
USP47-205ENST00000525257 CEBPZQ03701 1054 aaKnown RBP25.65■■□□□ 1.7
USP47-205ENST00000525257 ALCAMQ13740 583 aa25.65■■□□□ 1.7
USP47-205ENST00000525257 RNF43Q68DV7 783 aa25.65■■□□□ 1.7
USP47-205ENST00000525257 FAM173BQ6P4H8 233 aa25.65■■□□□ 1.7
USP47-205ENST00000525257 C4orf50Q6ZRC1 276 aa25.65■■□□□ 1.7
USP47-205ENST00000525257 ANKRD36BP1Q96IX9 119 aa25.65■■□□□ 1.7
USP47-205ENST00000525257 SYT15Q9BQS2 421 aa25.65■■□□□ 1.7
USP47-205ENST00000525257 PANK2Q9BZ23 570 aa25.65■■□□□ 1.7
USP47-205ENST00000525257 LINC00597Q9H2U6 94 aa25.65■■□□□ 1.7
USP47-205ENST00000525257 UPF2Q9HAU5 1272 aaKnown RBP25.65■■□□□ 1.7
USP47-205ENST00000525257 R3HCC1Q9Y3T6 440 aaKnown RBP25.65■■□□□ 1.7
USP47-205ENST00000525257 PTPRJQ12913 1337 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 RHOBTB1O94844 696 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 HDCP19113 662 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 STAT6P42226 847 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 MAGEA11P43364 429 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 DGKEP52429 567 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 MYO1EQ12965 1108 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 NR1H3Q13133 447 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 FAM171BQ6P995 826 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 GPD1LQ8N335 351 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 OR5B17Q8NGF7 314 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 KBTBD7Q8WVZ9 684 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 MYLPFQ96A32 169 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 PANK4Q9NVE7 773 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 MAGEC2Q9UBF1 373 aaPredicted RBP25.64■■□□□ 1.7
USP47-205ENST00000525257 EBF1Q9UH73 591 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 INVSQ9Y283 1065 aa25.64■■□□□ 1.7
USP47-205ENST00000525257 FRMD3A2A2Y4 597 aa25.63■■□□□ 1.69
USP47-205ENST00000525257 LMO2P25791 158 aa25.63■■□□□ 1.69
USP47-205ENST00000525257 GBP1P32455 592 aa25.63■■□□□ 1.69
USP47-205ENST00000525257 SEC13P55735 322 aa25.63■■□□□ 1.69
USP47-205ENST00000525257 CCDC73Q6ZRK6 1079 aa25.63■■□□□ 1.69
USP47-205ENST00000525257 TSTD1Q8NFU3 115 aa25.63■■□□□ 1.69
USP47-205ENST00000525257 HPDLQ96IR7 371 aa25.63■■□□□ 1.69
USP47-205ENST00000525257 EDEM2Q9BV94 578 aa25.63■■□□□ 1.69
USP47-205ENST00000525257 LSM14BQ9BX40 385 aaKnown RBP25.63■■□□□ 1.69
USP47-205ENST00000525257 CRTAC1Q9NQ79 661 aa25.63■■□□□ 1.69
USP47-205ENST00000525257 INTS13Q9NVM9 706 aa25.63■■□□□ 1.69
USP47-205ENST00000525257 ARHGAP26Q9UNA1 814 aa25.63■■□□□ 1.69
USP47-205ENST00000525257 CFAP47Q6ZTR5 3102 aa25.63■■□□□ 1.69
USP47-205ENST00000525257 CHD6Q8TD26 2715 aa25.63■■□□□ 1.69
USP47-205ENST00000525257 A0A087X0B3 334 aa25.62■■□□□ 1.69
USP47-205ENST00000525257 KCNK5O95279 499 aa25.62■■□□□ 1.69
USP47-205ENST00000525257 NFATC1O95644 943 aa25.62■■□□□ 1.69
USP47-205ENST00000525257 TNNC2P02585 160 aa25.62■■□□□ 1.69
USP47-205ENST00000525257 BDNFP23560 247 aa25.62■■□□□ 1.69
USP47-205ENST00000525257 USP46P62068 366 aa25.62■■□□□ 1.69
USP47-205ENST00000525257 TPSD1Q9BZJ3 242 aa25.62■■□□□ 1.69
USP47-205ENST00000525257 CDH9Q9ULB4 789 aa25.62■■□□□ 1.69
USP47-205ENST00000525257 PTPRDP23468 1912 aa25.61■■□□□ 1.69
USP47-205ENST00000525257 CAVIN2O95810 425 aa25.61■■□□□ 1.69
USP47-205ENST00000525257 PDGFRBP09619 1106 aa25.61■■□□□ 1.69
USP47-205ENST00000525257 TCF3P15923 654 aa25.61■■□□□ 1.69
USP47-205ENST00000525257 GRIK1P39086 918 aa25.61■■□□□ 1.69
USP47-205ENST00000525257 ZXDBP98169 803 aa25.61■■□□□ 1.69
USP47-205ENST00000525257 CYP27A1Q02318 531 aa25.61■■□□□ 1.69
USP47-205ENST00000525257 RESTQ13127 1097 aa25.61■■□□□ 1.69
USP47-205ENST00000525257 C2orf27AQ580R0 203 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms