RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 LOC102723971A0A1B0GUV8 181 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 RASSF9O75901 435 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 MT-ND5P03915 603 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 ERBB2P04626 1255 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 TXNP10599 105 aaKnown RBP5.31□□□□□ -1.56
CD44-215ENST00000525241 TM4SF4P48230 202 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 NEK3P51956 506 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 TGFB2P61812 414 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 MRPS35P82673 323 aaKnown RBP5.31□□□□□ -1.56
CD44-215ENST00000525241 SATB1Q01826 763 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 COL10A1Q03692 680 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 IFIT5Q13325 482 aaKnown RBP5.31□□□□□ -1.56
CD44-215ENST00000525241 ZNF169Q14929 603 aaPredicted RBP5.31□□□□□ -1.56
CD44-215ENST00000525241 NPY5RQ15761 445 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 NBPF8Q3BBV2 869 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 KAZNQ674X7 775 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 RNF152Q8N8N0 203 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 GPR150Q8NGU9 434 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 ATG4AQ8WYN0 398 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 RFKQ969G6 155 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 PPP2R3CQ969Q6 453 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 FKBP10Q96AY3 582 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 CHFRQ96EP1 664 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 PDLIM2Q96JY6 352 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 SNX22Q96L94 193 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 PPP1R9BQ96SB3 815 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 PNPLA8Q9NP80 782 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 DKK3Q9UBP4 350 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 PHTF1Q9UMS5 762 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 DMRT1Q9Y5R6 373 aa5.31□□□□□ -1.56
CD44-215ENST00000525241 POM121BA6NF01 834 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 CCP110O43303 1012 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 RHOBTB3O94955 611 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 PARP1P09874 1014 aaKnown RBP5.3□□□□□ -1.56
CD44-215ENST00000525241 TSHRP16473 764 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 BTF3P20290 206 aaKnown RBP5.3□□□□□ -1.56
CD44-215ENST00000525241 CARSP49589 748 aaKnown RBP5.3□□□□□ -1.56
CD44-215ENST00000525241 ALDH5A1P51649 535 aaPredicted RBP5.3□□□□□ -1.56
CD44-215ENST00000525241 MAPK10P53779 464 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 PICALMQ13492 652 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 TBCCQ15814 346 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 INSCQ1MX18 579 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 PTCHD3Q3KNS1 767 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 FCRL6Q6DN72 434 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 MAVSQ7Z434 540 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 KCTD20Q7Z5Y7 419 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 SLC15A3Q8IY34 581 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 ACTRT2Q8TDY3 377 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 PARD3BQ8TEW8 1205 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 SLC9A6Q92581 669 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 AGAP2Q99490 1192 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 ALG8Q9BVK2 526 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 DHX36Q9H2U1 1008 aaKnown RBP5.3□□□□□ -1.56
CD44-215ENST00000525241 LRIT1Q9P2V4 623 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 DNMT3BQ9UBC3 853 aaKnown RBP5.3□□□□□ -1.56
CD44-215ENST00000525241 MID2Q9UJV3 735 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 ITGB1BP2Q9UKP3 347 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 HDAC9Q9UKV0 1011 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 CDY1Q9Y6F8 540 aa5.3□□□□□ -1.56
CD44-215ENST00000525241 CCDC194A0A1B0GVG4 234 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 H7C4K7 107 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 ANXA2P07355 339 aaKnown RBP5.29□□□□□ -1.56
CD44-215ENST00000525241 ELFN1P0C7U0 828 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 ADORA2AP29274 412 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 ATXN1P54253 815 aaKnown RBP5.29□□□□□ -1.56
CD44-215ENST00000525241 SIM1P81133 766 aaPredicted RBP5.29□□□□□ -1.56
CD44-215ENST00000525241 EIF2B5Q13144 721 aaKnown RBP5.29□□□□□ -1.56
CD44-215ENST00000525241 ARHGEF7Q14155 803 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 SLC29A2Q14542 456 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 LONRF1Q17RB8 773 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 KLHDC7AQ5VTJ3 777 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 PEG10Q86TG7 708 aaKnown RBP5.29□□□□□ -1.56
CD44-215ENST00000525241 LIX1LQ8IVB5 337 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 ATP11CQ8NB49 1132 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 SVIPQ8NHG7 77 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 PBKQ96KB5 322 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 MRIQ9BWK5 157 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 EHD3Q9NZN3 535 aa5.29□□□□□ -1.56
CD44-215ENST00000525241 RAB27BO00194 218 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 SLC16A3O15427 465 aaKnown RBP5.28□□□□□ -1.56
CD44-215ENST00000525241 RRP9O43818 475 aaKnown RBP5.28□□□□□ -1.56
CD44-215ENST00000525241 TLR5O60602 858 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 ACVR2AP27037 513 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 IL1R2P27930 398 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 PCSK6P29122 969 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 LIPAP38571 399 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 GRIA3P42263 894 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 STT3AP46977 705 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 PTDSS1P48651 473 aaKnown RBP5.28□□□□□ -1.56
CD44-215ENST00000525241 RARRES1P49788 294 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 PDE6CP51160 858 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 PRKAG1P54619 331 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 AK2P54819 239 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 BMPR2Q13873 1038 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 OLFML1Q6UWY5 402 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 DPP9Q86TI2 863 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 YAF2Q8IY57 180 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 ABRAQ8N0Z2 381 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 SDR16C5Q8N3Y7 309 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms