RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ITIH3Q06033 890 aa21.27■■□□□ 1
USP53-203ENST00000507597 KCNC3Q14003 757 aa21.27■■□□□ 1
USP53-203ENST00000507597 ASIC2Q16515 512 aa21.27■■□□□ 1
USP53-203ENST00000507597 CTC1Q2NKJ3 1217 aa21.27■■□□□ 1
USP53-203ENST00000507597 ANKRD54Q6NXT1 300 aa21.27■■□□□ 1
USP53-203ENST00000507597 SPATA31D4Q6ZUB0 917 aa21.27■■□□□ 1
USP53-203ENST00000507597 FUKQ8N0W3 1084 aa21.27■■□□□ 1
USP53-203ENST00000507597 CPLX3Q8WVH0 158 aa21.27■■□□□ 1
USP53-203ENST00000507597 C8orf48Q96LL4 319 aa21.27■■□□□ 1
USP53-203ENST00000507597 DUSP16Q9BY84 665 aa21.27■■□□□ 1
USP53-203ENST00000507597 UBXN6Q9BZV1 441 aa21.27■■□□□ 1
USP53-203ENST00000507597 TTYH3Q9C0H2 523 aa21.27■■□□□ 1
USP53-203ENST00000507597 PIDD1Q9HB75 910 aa21.27■■□□□ 1
USP53-203ENST00000507597 PNPLA8Q9NP80 782 aa21.27■■□□□ 1
USP53-203ENST00000507597 TSPAN16Q9UKR8 245 aa21.27■■□□□ 1
USP53-203ENST00000507597 COG5Q9UP83 839 aa21.27■■□□□ 1
USP53-203ENST00000507597 SLC27A5Q9Y2P5 690 aa21.27■■□□□ 1
USP53-203ENST00000507597 YIPF1Q9Y548 306 aa21.27■■□□□ 1
USP53-203ENST00000507597 NPR3P17342 541 aa21.26■□□□□ 0.99
USP53-203ENST00000507597 CLCN1P35523 988 aa21.26■□□□□ 0.99
USP53-203ENST00000507597 BST2Q10589 180 aaKnown RBP21.26■□□□□ 0.99
USP53-203ENST00000507597 GSE1Q14687 1217 aa21.26■□□□□ 0.99
USP53-203ENST00000507597 CCDC85BQ15834 202 aaPredicted RBP21.26■□□□□ 0.99
USP53-203ENST00000507597 VPS36Q86VN1 386 aa21.26■□□□□ 0.99
USP53-203ENST00000507597 LEMD2Q8NC56 503 aa21.26■□□□□ 0.99
USP53-203ENST00000507597 PPM1EQ8WY54 764 aa21.26■□□□□ 0.99
USP53-203ENST00000507597 SPATA17Q96L03 361 aa21.26■□□□□ 0.99
USP53-203ENST00000507597 NOX5Q96PH1 765 aa21.26■□□□□ 0.99
USP53-203ENST00000507597 RHOBTB2Q9BYZ6 727 aa21.26■□□□□ 0.99
USP53-203ENST00000507597 GPR88Q9GZN0 384 aa21.26■□□□□ 0.99
USP53-203ENST00000507597 KRT82Q9NSB4 513 aa21.26■□□□□ 0.99
USP53-203ENST00000507597 COMMD8Q9NX08 183 aa21.26■□□□□ 0.99
USP53-203ENST00000507597 AIPL1Q9NZN9 384 aa21.26■□□□□ 0.99
USP53-203ENST00000507597 AJAP1Q9UKB5 411 aaPredicted RBP21.26■□□□□ 0.99
USP53-203ENST00000507597 CCDC195A0A1B0GUA6 201 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 LRRC53A6NM62 1247 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 O00370 1275 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 SEC24AO95486 1093 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 FGF19O95750 216 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 CYP11B1P15538 503 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 BRD2P25440 801 aaKnown RBP21.25■□□□□ 0.99
USP53-203ENST00000507597 CASP14P31944 242 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 GTF2F1P35269 517 aaKnown RBP eCLIP21.25■□□□□ 0.99
USP53-203ENST00000507597 TWF1Q12792 350 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 COL19A1Q14993 1142 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 PTPN21Q16825 1174 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 GOLGA7BQ2TAP0 167 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 PPP1R2P3Q6NXS1 205 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 MSANTD4Q8NCY6 345 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 OR8K1Q8NGG5 319 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 BAP1Q92560 729 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 HLA-CQ95604 372 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 PRKD2Q9BZL6 878 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 ZNF518BQ9C0D4 1074 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 CSNK1G1Q9HCP0 422 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 IMPACTQ9P2X3 320 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 UXTQ9UBK9 157 aaPredicted RBP21.25■□□□□ 0.99
USP53-203ENST00000507597 PCDHGC3Q9UN70 934 aa21.25■□□□□ 0.99
USP53-203ENST00000507597 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.25■□□□□ 0.99
USP53-203ENST00000507597 AKR1B15C9JRZ8 316 aaPredicted RBP21.24■□□□□ 0.99
USP53-203ENST00000507597 M0QYV0 167 aa21.24■□□□□ 0.99
USP53-203ENST00000507597 CLDN5O00501 218 aa21.24■□□□□ 0.99
USP53-203ENST00000507597 AP5Z1O43299 807 aa21.24■□□□□ 0.99
USP53-203ENST00000507597 RTN3O95197 1032 aaPredicted RBP21.24■□□□□ 0.99
USP53-203ENST00000507597 GYPCP04921 128 aa21.24■□□□□ 0.99
USP53-203ENST00000507597 ARID5AQ03989 594 aa21.24■□□□□ 0.99
USP53-203ENST00000507597 TRIM72Q6ZMU5 477 aa21.24■□□□□ 0.99
USP53-203ENST00000507597 SLC47A2Q86VL8 602 aa21.24■□□□□ 0.99
USP53-203ENST00000507597 MAFAQ8NHW3 353 aaPredicted RBP21.24■□□□□ 0.99
USP53-203ENST00000507597 RIPOR3Q96MK2 946 aa21.24■□□□□ 0.99
USP53-203ENST00000507597 MIS12Q9H081 205 aa21.24■□□□□ 0.99
USP53-203ENST00000507597 CHD7Q9P2D1 2997 aa21.24■□□□□ 0.99
USP53-203ENST00000507597 FAM50BQ9Y247 325 aa21.24■□□□□ 0.99
USP53-203ENST00000507597 F8VP50 259 aa21.23■□□□□ 0.99
USP53-203ENST00000507597 XPO1O14980 1071 aaKnown RBP21.23■□□□□ 0.99
USP53-203ENST00000507597 MICAL2O94851 1124 aa21.23■□□□□ 0.99
USP53-203ENST00000507597 PTPN2P17706 415 aa21.23■□□□□ 0.99
USP53-203ENST00000507597 MAP3K7CLP57077 242 aa21.23■□□□□ 0.99
USP53-203ENST00000507597 KLHL30Q0D2K2 578 aa21.23■□□□□ 0.99
USP53-203ENST00000507597 ATAT1Q5SQI0 421 aa21.23■□□□□ 0.99
USP53-203ENST00000507597 DENND5BQ6ZUT9 1274 aa21.23■□□□□ 0.99
USP53-203ENST00000507597 PAQR9Q6ZVX9 377 aa21.23■□□□□ 0.99
USP53-203ENST00000507597 NUP93Q8N1F7 819 aa21.23■□□□□ 0.99
USP53-203ENST00000507597 TMEM35BQ8NCS4 154 aa21.23■□□□□ 0.99
USP53-203ENST00000507597 LPIN3Q9BQK8 851 aa21.23■□□□□ 0.99
USP53-203ENST00000507597 LHX5Q9H2C1 402 aa21.23■□□□□ 0.99
USP53-203ENST00000507597 FBXO44Q9H4M3 255 aa21.23■□□□□ 0.99
USP53-203ENST00000507597 ZNF197O14709 1029 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 LINC01565O15544 149 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 VNN2O95498 520 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 GLP2RO95838 553 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 PNMA6AP0CW24 399 aaPredicted RBP21.22■□□□□ 0.99
USP53-203ENST00000507597 MTHFRP42898 656 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 ACADSBP45954 432 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 CDR2Q01850 454 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 DDR2Q16832 855 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 PUS10Q3MIT2 529 aaKnown RBP21.22■□□□□ 0.99
USP53-203ENST00000507597 CYP4A22Q5TCH4 519 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 VN1R2Q8NFZ6 395 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 EPS8L1Q8TE68 723 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms